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RBG1351_27_12 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A Tax=RBG_16_Chloroflexi_50_11_curated UNIPROT
DB: UniProtKB
88.2 482.0 813 1.40e-232 ggdbv1_86967238
nusA; transcription elongation factor NusA rbh KEGG
DB: KEGG
57.6 491.0 519 8.50e-145 dmg:GY50_0867
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
57.6 491.0 519 8.50e-145 dmg:GY50_0867
NusA antitermination factor n=5 Tax=Dehalococcoides mccartyi RepID=A5FQR8_DEHSB (db=UNIREF evalue=9.1e-145 bit_score=519.2 identity=57.6 coverage=99.16839916839916) similarity UNIREF
DB: UNIREF
57.0 99.0 519 9.00e+00 dmg:GY50_0867
seg (db=Seg db_id=seg from=473 to=478) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dmg:GY50_0867
seg (db=Seg db_id=seg from=378 to=404) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dmg:GY50_0867
seg (db=Seg db_id=seg from=338 to=365) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dmg:GY50_0867
seg (db=Seg db_id=seg from=437 to=457) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dmg:GY50_0867
UniRef90_A5FQR8 NusA antitermination factor n=5 Tax=Dehalococcoides mccartyi RepID=A5FQR8_DEHSB (db=UNIREF) rbh rbh UNIREF
DB: UNIREF
0.0 0.0 0 0.0 dmg:GY50_0867
no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=1 to=135 evalue=1.3e-37 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 dmg:GY50_0867
no description (db=HMMSmart db_id=SM00322 from=301 to=371 evalue=1.7e-06 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 dmg:GY50_0867
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=200 to=277 evalue=2.1e-32 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 dmg:GY50_0867
no description (db=HMMSmart db_id=SM00316 from=134 to=200 evalue=2.5e-10 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.00e+00 dmg:GY50_0867
Transcription factor NusA, N-terminal domain (db=superfamily db_id=SSF69705 from=1 to=127 evalue=2.9e-36 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 dmg:GY50_0867
NusA: transcription termination factor NusA (db=HMMTigr db_id=TIGR01953 from=4 to=343 evalue=2.3e-165 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 2.00e+00 dmg:GY50_0867
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=132 to=199 evalue=2.3e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 dmg:GY50_0867
(db=HMMPfam db_id=PF00575 from=134 to=194 evalue=3.4e-09 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 dmg:GY50_0867
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=151 to=213 evalue=3.9e-18 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 3.00e+00 dmg:GY50_0867
TRANSCRIPTION TERMINATION FACTOR NUSA (db=HMMPanther db_id=PTHR22648 from=1 to=435 evalue=4.6e-125) iprscan interpro
DB: HMMPanther
0.0 0.0 0 4.00e+00 dmg:GY50_0867
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=279 to=344 evalue=5.6e-18 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 dmg:GY50_0867
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=214 to=292 evalue=6.4e-30 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta) iprscan interpro
DB: Gene3D
0.0 0.0 0 6.00e+00 dmg:GY50_0867
(db=HMMPfam db_id=PF08529 from=4 to=124 evalue=8.3e-39 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 8.00e+00 dmg:GY50_0867
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=292 to=344 evalue=8.1e-14 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta) iprscan interpro
DB: Gene3D
0.0 0.0 0 8.00e+00 dmg:GY50_0867
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=302 to=366 evalue=9.75 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 9.00e+00 dmg:GY50_0867
S1 (db=ProfileScan db_id=PS50126 from=136 to=200 evalue=12.102 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.20e+01 dmg:GY50_0867
no description (db=HMMSmart db_id=SM00322 from=230 to=293 evalue=18.0 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.80e+01 dmg:GY50_0867