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RBG1351_27

Alias: RBG_1351c3_27

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_27_1
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..1050)
DNA (1050bp) protein (350aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_13_Chloroflexi_51_52_curated
adenylosuccinate synthetase (EC:6.3.4.4)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=6 Tax=Dehalococcoides mccartyi RepID=PURA_DEHSB (db=UNIREF evalue=3.4e-125 bit_score=453.8 identity=60.6 coverage=99.71428571428571)
RBG1351_27_2
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(1148..1744)
DNA (597bp) protein (199aa)
phosphatidylglycerophosphate synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_13_Chloroflexi_51_52_curated
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=A5FQS5_DEHSB (db=UNIREF evalue=8.6e-49 bit_score=199.1 identity=52.8 coverage=96.4824120603015)
seg (db=Seg db_id=seg from=116 to=130)
RBG1351_27_3
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(1786..2934)
DNA (1149bp) protein (383aa)
glycosyl transferase group 1 protein; K08256 phosphatidylinositol alpha-mannosyltransferase [EC:2.4.1.57] Tax=RBG_13_Chloroflexi_51_52_curated
glycosyl transferase group 1 protein
glycosyl transferase group 1 protein
Glycosyl transferase group 1 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZR2_DEHLB (db=UNIREF evalue=2.7e-115 bit_score=421.0 identity=55.6 coverage=97.12793733681463)
RBG1351_27_4
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(2941..4056)
DNA (1116bp) protein (372aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Chloroflexi_51_52_curated
myo-inositol-1-phosphate synthase
myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase n=5 Tax=Dehalococcoides mccartyi RepID=A5FQS7_DEHSB (db=UNIREF evalue=7.7e-168 bit_score=595.5 identity=78.5 coverage=98.38709677419355)
RBG1351_27_5
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(4212..5294)
DNA (1083bp) protein (361aa)
Tax=RBG_13_Chloroflexi_51_52_curated
4212..5294 - ( gc_cont=0.445)
RBG1351_27_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(5311..6213)
DNA (903bp) protein (301aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RBG_13_Chloroflexi_51_52_curated
tRNA pseudouridine synthase B n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJS8_9CHLR (db=UNIREF evalue=1.2e-62 bit_score=245.7 identity=43.9 coverage=97.34219269102991)
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
TRNA-PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR13767 from=95 to=298 evalue=1.2e-40 interpro_id=IPR014780 interpro_description=tRNA pseudouridine synthase II, TruB GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
RBG1351_27_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(6230..6826)
DNA (597bp) protein (199aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.-); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=RBG_13_Chloroflexi_51_52_curated
LL-diaminopimelate aminotransferase, methanococcal (EC:2.6.1.83)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8LZR9_CLOCD (db=UNIREF evalue=1.4e-22 bit_score=112.1 identity=35.4 coverage=93.46733668341709)
AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751:SF33 from=2 to=195 evalue=2.6e-31)
RBG1351_27_8
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7002..7478)
DNA (477bp) protein (159aa)
aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=RBG_13_Chloroflexi_46_14_curated
ASPARTATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11751:SF35 from=72 to=111 evalue=0.00035)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=72 to=111 evalue=0.00035)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=128 evalue=1.3e-15 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
RBG1351_27_9
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(7518..7871)
DNA (354bp) protein (118aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RBG_13_Chloroflexi_51_18_curated
rbfA; ribosome-binding factor A
Ribosome-binding factor A n=6 Tax=Clostridium thermocellum RepID=RBFA_CLOTH (db=UNIREF evalue=6.1e-26 bit_score=122.5 identity=50.9 coverage=95.76271186440678)
RBFA (db=PatternScan db_id=PS01319 from=74 to=95 evalue=0.0 interpro_id=IPR020053 interpro_description=Ribosome-binding factor A, conserved site GO=Biological Process: rRNA processing (GO:0006364))
RBG1351_27_10
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(7893..9572)
DNA (1680bp) protein (560aa)
infB; translation initiation factor 2 (IF-2); K02519 translation initiation factor IF-2 Tax=RBG_16_Chloroflexi_50_11_curated
infB; translation initiation factor 2 (IF-2)
infB; translation initiation factor 2 (IF-2)
Translation initiation factor IF-2 n=5 Tax=Dehalococcoides mccartyi RepID=IF2_DEHE1 (db=UNIREF evalue=1.0e-195 bit_score=688.7 identity=63.0 coverage=97.14285714285714)
RBG1351_27_11
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9732..10046)
DNA (315bp) protein (105aa)
hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
hypothetical protein
Putative uncharacterized protein n=4 Tax=Dehalococcoides mccartyi RepID=A5FQR7_DEHSB (db=UNIREF evalue=4.1e-18 bit_score=96.3 identity=44.3 coverage=89.52380952380953)
seg (db=Seg db_id=seg from=87 to=101)
RBG1351_27_12
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(10030..11472)
DNA (1443bp) protein (481aa)
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A Tax=RBG_16_Chloroflexi_50_11_curated
nusA; transcription elongation factor NusA
nusA; transcription elongation factor NusA
NusA antitermination factor n=5 Tax=Dehalococcoides mccartyi RepID=A5FQR8_DEHSB (db=UNIREF evalue=9.1e-145 bit_score=519.2 identity=57.6 coverage=99.16839916839916)
RBG1351_27_13
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

11754..12959
DNA (1206bp) protein (402aa)
amidohydrolase Tax=RBG_13_Chloroflexi_51_18_curated
peptidase, M20 family
peptidase, M20 family
Metal-dependent amidase/aminoacylase/carboxypeptidase n=5 Tax=Dehalococcoides mccartyi RepID=D2BH40_DEHSV (db=UNIREF evalue=3.2e-103 bit_score=380.9 identity=50.4 coverage=95.02487562189054)
RBG1351_27_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

12937..13917
DNA (981bp) protein (327aa)
CoA-substrate-specific enzyme activase Tax=RBG_13_Chloroflexi_51_52_curated
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CJH6_DESK7 (db=UNIREF evalue=1.0e-99 bit_score=369.0 identity=57.1 coverage=96.3302752293578)
RBG1351_27_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

13914..14936
DNA (1023bp) protein (341aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_13_Chloroflexi_51_52_curated
fatty acid/phospholipid synthesis protein PlsX
fatty acid/phospholipid synthesis protein PlsX
Phosphate acyltransferase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K018_DEHLB (db=UNIREF evalue=3.3e-101 bit_score=374.0 identity=54.9 coverage=98.24046920821115)
RBG1351_27_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

14914..15246
DNA (333bp) protein (111aa)
thioredoxin; K03671 thioredoxin 1 Tax=RBG_13_Chloroflexi_51_52_curated
LPBCA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI0002638C92 (db=UNIREF evalue=4.4e-34 bit_score=149.4 identity=63.1 coverage=91.8918918918919)
trxA2; thioredoxin
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=24 to=42 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
RBG1351_27_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

15252..16178
DNA (927bp) protein (309aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_13_Chloroflexi_51_52_curated
thioredoxin reductase
thioredoxin reductase
Thioredoxin reductase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K017_DEHLB (db=UNIREF evalue=1.8e-93 bit_score=348.2 identity=56.8 coverage=97.0873786407767)
RBG1351_27_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists


16280..17122
DNA (843bp) protein (281aa)
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RBG_13_Chloroflexi_51_52_curated
50S ribosomal protein L9 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD55_THET1 (db=UNIREF evalue=3.3e-30 bit_score=137.9 identity=49.7 coverage=52.66903914590747)
50S ribosomal protein L9
coiled-coil (db=Coil db_id=coil from=251 to=281 evalue=NA)
RBG1351_27_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

17115..18497
DNA (1383bp) protein (461aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RBG_13_Chloroflexi_51_52_curated
replicative DNA helicase
replicative DNA helicase
Primary replicative DNA helicase n=5 Tax=Dehalococcoides mccartyi RepID=A5FRS9_DEHSB (db=UNIREF evalue=1.9e-171 bit_score=607.8 identity=66.6 coverage=99.13232104121475)
RBG1351_27_20
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

18494..19201
DNA (708bp) protein (236aa)
dnaD; primosome component Tax=RBG_13_Chloroflexi_51_52_curated
dnaD; primosome component
DnaD/phage-associated domain protein n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z916_DEHE1 (db=UNIREF evalue=1.5e-47 bit_score=195.3 identity=44.7 coverage=96.61016949152543)
DnaD_dom: DnaD and phage-associated domain (db=HMMTigr db_id=TIGR01446 from=146 to=215 evalue=1.6e-10 interpro_id=IPR006343 interpro_description=Replication protein, DnaD/DnaB domain)
RBG1351_27_21
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

19380..20531
DNA (1152bp) protein (384aa)
ATP-binding protein; K02315 DNA replication protein DnaC Tax=RBG_13_Chloroflexi_51_18_curated
ATP-binding protein
ATP-binding protein
DNA replication protein n=5 Tax=Dehalococcoides mccartyi RepID=D2BH33_DEHSV (db=UNIREF evalue=1.0e-114 bit_score=419.1 identity=55.9 coverage=96.61458333333334)
RBG1351_27_22
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(20528..21193)
DNA (666bp) protein (222aa)
ferredoxin Tax=RBG_13_Chloroflexi_51_18_curated
putative anaerobic dehydrogenase
Ferredoxin n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I024_9FIRM (db=UNIREF evalue=1.7e-66 bit_score=258.1 identity=57.8 coverage=94.14414414414415)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=194 to=205 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
RBG1351_27_23
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(21190..21279)
DNA (90bp) protein (30aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_13_Chloroflexi_51_18_curated
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=1 to=12 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=1 to=24 evalue=8.407 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain GO=Molecular Function: iron-sulfur cluster binding (GO:0051536))
Displaying 23 items

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