| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_13_Chloroflexi_51_52_curated |
UNIPROT
DB: UniProtKB |
100.0 | 748.0 | 1438 | 0.0 | ggdbv1_86739314 | |
| polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8) | rbh |
KEGG
DB: KEGG |
59.1 | 719.0 | 862 | 1.10e-247 | deb:DehaBAV1_0861 |
| polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8) | similarity |
KEGG
DB: KEGG |
59.1 | 719.0 | 862 | 1.10e-247 | deb:DehaBAV1_0861 |
| Polyribonucleotide nucleotidyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=PNP_DEHE1 (db=UNIREF evalue=1.1e-242 bit_score=845.1 identity=57.4 coverage=95.86114819759679) | similarity |
UNIREF
DB: UNIREF |
57.0 | 95.0 | 845 | 1.00e+00 | deb:DehaBAV1_0861 |
| coiled-coil (db=Coil db_id=coil from=207 to=228 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | null | deb:DehaBAV1_0861 |
| Polyribonucleotide nucleotidyltransferase (db=HMMPIR db_id=PIRSF005499 from=1 to=706 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPIR |
0.0 | 0.0 | 0 | 0.0 | deb:DehaBAV1_0861 |
| seg (db=Seg db_id=seg from=423 to=435) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | deb:DehaBAV1_0861 |
| seg (db=Seg db_id=seg from=227 to=238) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | deb:DehaBAV1_0861 |
| seg (db=Seg db_id=seg from=714 to=721) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | deb:DehaBAV1_0861 |
| UniRef90_Q3Z7V6 Polyribonucleotide nucleotidyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=PNP_DEHE1 (db=UNIREF) rbh | rbh |
UNIREF
DB: UNIREF |
0.0 | 0.0 | 0 | 0.0 | deb:DehaBAV1_0861 |
| polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=9 to=689 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 0.0 | deb:DehaBAV1_0861 |
| Eukaryotic type KH-domain (KH-domain type I) (db=superfamily db_id=SSF54791 from=537 to=633 evalue=3.7e-25) | iprscan | interpro | 0.0 | 0.0 | 0 | 3.70e-25 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF00013 from=553 to=609 evalue=1.2e-11 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | deb:DehaBAV1_0861 |
| no description (db=HMMSmart db_id=SM00322 from=549 to=614 evalue=1.1e-11 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 1.00e+00 | deb:DehaBAV1_0861 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=614 to=689 evalue=1.7e-20 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | deb:DehaBAV1_0861 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=605 to=688 evalue=1.3e-23 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | deb:DehaBAV1_0861 |
| Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=143 evalue=1.0e-49 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF00575 from=617 to=687 evalue=2.0e-18 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | deb:DehaBAV1_0861 |
| Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=449 to=557 evalue=2.1e-27 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | deb:DehaBAV1_0861 |
| Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=144 to=237 evalue=2.1e-27 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF03725 from=456 to=526 evalue=3.3e-06 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF03725 from=146 to=210 evalue=3.1e-16 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | deb:DehaBAV1_0861 |
| Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=318 to=454 evalue=3.3e-45 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | deb:DehaBAV1_0861 |
| Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (db=superfamily db_id=SSF46915 from=225 to=322 evalue=3.6e-17 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | deb:DehaBAV1_0861 |
| no description (db=HMMSmart db_id=SM00316 from=617 to=687 evalue=3.8e-25 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 3.00e+00 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF01138 from=319 to=452 evalue=5.1e-19 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 5.00e+00 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF03726 from=243 to=316 evalue=6.5e-07 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | deb:DehaBAV1_0861 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.400 from=224 to=316 evalue=7.2e-06 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 7.00e+00 | deb:DehaBAV1_0861 |
| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR11252 from=144 to=705 evalue=7.0e-218 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 7.00e+00 | deb:DehaBAV1_0861 |
| (db=HMMPfam db_id=PF01138 from=12 to=143 evalue=8.4e-20 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 8.00e+00 | deb:DehaBAV1_0861 |
| KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=550 to=609 evalue=12.118 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.20e+01 | deb:DehaBAV1_0861 |
| S1 (db=ProfileScan db_id=PS50126 from=619 to=687 evalue=21.619 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 2.10e+01 | deb:DehaBAV1_0861 |
| PNPase (db=HAMAP db_id=MF_01595 from=2 to=690 evalue=29.153 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HAMAP |
0.0 | 0.0 | 0 | 2.90e+01 | deb:DehaBAV1_0861 |
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