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RBG1351_32

Alias: RBG_1351c3_32

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_32_1
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..346)
DNA (345bp) protein (115aa)
hydrogenase maturation protease Tax=RBG_16_Chloroflexi_56_11_curated
hydrogenase maturation protease
Hydrogenase maturation protease n=1 Tax=Thermincola potens JR RepID=D5X9S6_THEPJ (db=UNIREF evalue=4.1e-19 bit_score=99.8 identity=43.6 coverage=85.21739130434783)
HybD-like (db=superfamily db_id=SSF53163 from=16 to=115 evalue=1.0e-21 interpro_id=IPR023430 interpro_description=Peptidase HybD-like domain)
RBG1351_32_2
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(357..1004)
DNA (648bp) protein (216aa)
hypE; hydrogenase maturation factor; K04655 hydrogenase expression/formation protein HypE Tax=RBG_16_Chloroflexi_56_11_curated
hydrogenase
Hydrogenase expression/formation protein HypE n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z6K6_DEHE1 (db=UNIREF evalue=7.6e-75 bit_score=285.8 identity=64.2 coverage=99.07407407407408)
no description (db=Gene3D db_id=G3DSA:3.90.650.10 from=36 to=191 evalue=1.2e-22)
RBG1351_32_3
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1360..2493)
DNA (1134bp) protein (378aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RBG_13_Chloroflexi_52_12_curated
hypD; hydrogenase expression/formation protein HypD
hypD; hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD n=5 Tax=Dehalococcoides mccartyi RepID=A5FPQ9_DEHSB (db=UNIREF evalue=4.1e-132 bit_score=476.9 identity=61.0 coverage=95.76719576719577)
RBG1351_32_4
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2562..2780)
DNA (219bp) protein (73aa)
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC Tax=RBG_13_Chloroflexi_52_12_curated
hydrogenase assembly chaperone HypC/HupF
Hydrogenase expression/formation protein HypC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FG29_DESAA (db=UNIREF evalue=7.8e-16 bit_score=88.2 identity=59.7 coverage=97.26027397260275)
seg (db=Seg db_id=seg from=49 to=60)
RBG1351_32_5
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2793..3371)
DNA (579bp) protein (193aa)
flavin reductase domain-containing protein Tax=RBG_13_Chloroflexi_52_12_curated
flavin reductase domain-containing protein
Flavin reductase domain protein, FMN-binding n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNW3_SYNFM (db=UNIREF evalue=1.7e-57 bit_score=228.0 identity=57.7 coverage=95.85492227979275)
no description (db=HMMSmart db_id=SM00903 from=11 to=163 evalue=2.8e-19 interpro_id=IPR002563 interpro_description=Flavin reductase-like, FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: flavin reductase activity (GO:0042602), Biological Process: oxidation-reduction process (GO:0055114))
RBG1351_32_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(3384..3962)
DNA (579bp) protein (193aa)
flavin reductase domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
flavin reductase domain-containing protein
Flavin reductase domain protein, FMN-binding n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNW3_SYNFM (db=UNIREF evalue=1.2e-58 bit_score=231.9 identity=53.7 coverage=97.92746113989638)
no description (db=Gene3D db_id=G3DSA:2.30.110.10 from=11 to=168 evalue=1.1e-36 interpro_id=IPR012349 interpro_description=FMN-binding split barrel GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
RBG1351_32_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(3968..6262)
DNA (2295bp) protein (765aa)
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=RBG_13_Chloroflexi_51_52_curated
(NiFe) hydrogenase maturation protein HypF
(NiFe) hydrogenase maturation protein HypF
(NiFe) hydrogenase maturation protein HypF n=3 Tax=Dehalococcoides mccartyi RepID=A5FPQ7_DEHSB (db=UNIREF evalue=1.8e-248 bit_score=864.4 identity=57.0 coverage=97.38562091503267)
RBG1351_32_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(6268..6936)
DNA (669bp) protein (223aa)
hypB; hydrogenase nickel incorporation protein HypB; K04652 hydrogenase nickel incorporation protein HypB Tax=RBG_13_Chloroflexi_51_52_curated
hypB; hydrogenase nickel incorporation protein HypB
Hydrogenase nickel incorporation protein HypB n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5U7_ANATU (db=UNIREF evalue=1.6e-64 bit_score=251.5 identity=57.3 coverage=94.61883408071749)
(db=HMMPfam db_id=PF02492 from=34 to=195 evalue=3.6e-36 interpro_id=IPR003495 interpro_description=Cobalamin (vitamin B12) biosynthesis CobW-like)
RBG1351_32_9
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(6937..7278)
DNA (342bp) protein (114aa)
hydrogenase nickel incorporation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RBG_13_Chloroflexi_51_52_curated
hydrogenase nickel incorporation protein HypA
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K268_DEHLB (db=UNIREF evalue=7.4e-29 bit_score=132.1 identity=49.6 coverage=98.24561403508771)
hypA: hydrogenase nickel insertion protein H (db=HMMTigr db_id=TIGR00100 from=1 to=113 evalue=1.6e-33 interpro_id=IPR000688 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF GO=Biological Process: protein modification process (GO:0006464), Molecular Function: nickel ion binding (GO:0016151))
RBG1351_32_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists


7635..7898
DNA (264bp) protein (88aa)
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RBG_13_Chloroflexi_51_52_curated
30S ribosomal protein S15 n=1 Tax=Lachnospiraceae bacterium ACC2 RepID=H1HRM5_9FIRM (db=UNIREF evalue=4.7e-23 bit_score=112.5 identity=60.9 coverage=97.72727272727273)
rpsO; 30S ribosomal protein S15
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=37 to=67 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RBG1351_32_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists


7926..10172
DNA (2247bp) protein (749aa)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_13_Chloroflexi_51_52_curated
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=PNP_DEHE1 (db=UNIREF evalue=1.1e-242 bit_score=845.1 identity=57.4 coverage=95.86114819759679)
RBG1351_32_12
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

10204..10995
DNA (792bp) protein (264aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RBG_13_Chloroflexi_48_17_curated
dihydrodipicolinate reductase (EC:1.3.1.26)
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=5 Tax=Dehalococcoides mccartyi RepID=DAPB_DEHSC (db=UNIREF evalue=1.2e-90 bit_score=338.6 identity=60.8 coverage=99.24242424242425)
RBG1351_32_13
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

11036..11935
DNA (900bp) protein (300aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RBG_13_Chloroflexi_48_17_curated
dihydrodipicolinate synthase
dihydrodipicolinate synthase
Dihydrodipicolinate synthase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZR6_DEHLB (db=UNIREF evalue=5.4e-95 bit_score=353.2 identity=57.2 coverage=98.66666666666667)
RBG1351_32_14
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

11959..12483
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=RBG_13_Chloroflexi_48_17_curated
11959..12483 + ( gc_cont=0.467)
RBG1351_32_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(12522..13670)
DNA (1149bp) protein (383aa)
family 2 glycosyl transferase; K14597 chlorobactene glucosyltransferase Tax=RBG_13_Chloroflexi_51_52_curated
family 2 glycosyl transferase
Glycosyl transferase family 2 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QV94_CHLT3 (db=UNIREF evalue=1.6e-64 bit_score=252.3 identity=35.0 coverage=97.38903394255874)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=329)
RBG1351_32_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(13696..14307)
DNA (612bp) protein (204aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Glycerol-3-phosphate acyltransferase 1 n=7 Tax=Caldicellulosiruptor RepID=B9MM86_ANATD (db=UNIREF evalue=1.0e-25 bit_score=122.5 identity=39.0 coverage=89.2156862745098)
seg (db=Seg db_id=seg from=169 to=180)
RBG1351_32_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(14378..14830)
DNA (453bp) protein (151aa)
Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=67 to=81)
seg (db=Seg db_id=seg from=39 to=51)
seg (db=Seg db_id=seg from=17 to=34)
RBG1351_32_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

14957..15520
DNA (564bp) protein (188aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_13_Chloroflexi_51_52_curated
Signal peptidase I n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M1V8_9FIRM (db=UNIREF evalue=2.1e-33 bit_score=147.9 identity=44.8 coverage=85.63829787234043)
signal peptidase I (EC:3.4.21.89)
seg (db=Seg db_id=seg from=13 to=31)
RBG1351_32_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

15563..16144
DNA (582bp) protein (194aa)
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RBG_13_Chloroflexi_51_52_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=A5FQD6_DEHSB (db=UNIREF evalue=1.3e-57 bit_score=228.4 identity=58.7 coverage=95.87628865979381)
seg (db=Seg db_id=seg from=131 to=146)
RBG1351_32_20
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

16197..16649
DNA (453bp) protein (151aa)
Holliday junction resolvase-like protein Tax=RBG_13_Chloroflexi_51_52_curated
Holliday junction resolvase-like protein
Holliday junction resolvase-like protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0R5_DEHLB (db=UNIREF evalue=3.7e-44 bit_score=183.3 identity=56.7 coverage=98.67549668874173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
RBG1351_32_21
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(16646..18367)
DNA (1722bp) protein (574aa)
mutL; MutL/HexB family DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=RBG_13_Chloroflexi_51_52_curated
mutL; MutL/HexB family DNA mismatch repair protein
mutL; MutL/HexB family DNA mismatch repair protein
DNA mismatch repair protein mutL n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z791_DEHE1 (db=UNIREF evalue=2.6e-146 bit_score=524.6 identity=48.6 coverage=98.25783972125436)
Displaying 21 items

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