ggKbase home page

RBG9_29_28

Organism: Uncultured Anaerolinea Chloroflexi RBG-9

near complete RP 51 / 55 MC: 15 BSCG 49 / 51 MC: 1 ASCG 0 / 38
Location: 28512..29165

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 394
  • Evalue 7.10e-107
RNA polymerase ECF-type sigma factor n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N229_ANATU (db=UNIREF evalue=4.7e-56 bit_score=223.4 identity=55.7 coverage=90.82568807339449) similarity UNIREF
DB: UNIREF
  • Identity: 55.0
  • Coverage: 90.0
  • Bit_score: 223
  • Evalue 4.00e+00
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 201.0
  • Bit_score: 220
  • Evalue 6.30e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_62_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 654
TTGCTGTACTGGTACCCCTACGCTATCATCGCACACCCAACCATGGATGAGCCGGAATTGATCCATGACGCCCAAAAGGGGGACCTCGAAGCCTTCAACCGGCTTGTCCTGGCGCATCAGTCGCGTGTTTTCAATGTTGCGCTGCGCATCATGGGTGATCCCGACTCGGCCTCCGACGCAACCCAAGAGGCGTTCATCTCCGCCTATCGCAACGTGCGACGATATCGTGGCGGGTCGTTCCAGGGATGGCTCCTGCGAATCGTGACCAACGCATGCTACGACGAGCTTCGGCGTCGGAAAAGGCGTCCGGCAACATCGATCGAAGAGTTGAGCACCGAGCCGGACGGCGACCCGGGCGAAGCCGGACTCAGTCTGGCCTCCCGTCACCAAGGACCCGAGGTAGCCGCCGAGGACGCCGAACTGAGCCGCGCGATCGAGGATTGTCTGCGCCGGTTGCCGGACGAATTCCGGGTTGTCGCGGTTTTGGCCGATGTTCAGGGTTATGAGTATGCTGAGGTCGCTCGAATGGTCGGCAAACCGCTGGGGACGGTCAAGAGCCGTCTGGCAAGGGCCCGGGCTCGACTTCGTGACTGCCTGCGACGATACGGGGAACTTTTGCCTTCGTCTCTCCGTCTCCAGGATGAGACAGCATGA
PROTEIN sequence
Length: 218
LLYWYPYAIIAHPTMDEPELIHDAQKGDLEAFNRLVLAHQSRVFNVALRIMGDPDSASDATQEAFISAYRNVRRYRGGSFQGWLLRIVTNACYDELRRRKRRPATSIEELSTEPDGDPGEAGLSLASRHQGPEVAAEDAELSRAIEDCLRRLPDEFRVVAVLADVQGYEYAEVARMVGKPLGTVKSRLARARARLRDCLRRYGELLPSSLRLQDETA*