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RBG9_29_28 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated UNIPROT
DB: UniProtKB
100.0 203.0 394 7.10e-107 ggdbv1_87241049
RNA polymerase ECF-type sigma factor n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N229_ANATU (db=UNIREF evalue=4.7e-56 bit_score=223.4 identity=55.7 coverage=90.82568807339449) similarity UNIREF
DB: UNIREF
55.0 90.0 223 4.00e+00 atm:ANT_29500
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
55.7 201.0 220 6.30e-55 atm:ANT_29500
seg (db=Seg db_id=seg from=187 to=201) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 atm:ANT_29500
(db=HMMPfam db_id=PF04542 from=35 to=102 evalue=1.0e-19 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 atm:ANT_29500
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=19 to=104 evalue=1.1e-23) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 atm:ANT_29500
(db=HMMPfam db_id=PF08281 from=143 to=195 evalue=2.5e-13 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 atm:ANT_29500
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=9 to=120 evalue=2.6e-27 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 atm:ANT_29500
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=30 to=199 evalue=2.7e-46 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 2.00e+00 atm:ANT_29500
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=134 to=201 evalue=5.3e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 atm:ANT_29500