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RBGRP_22_22

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: comp(15441..16181)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 481
  • Evalue 6.50e-133
rps3p; ribosomal protein S3P Rps3p similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 244.0
  • Bit_score: 232
  • Evalue 1.10e-58
Ribosomal protein S3, eukaryotic/archaeal type (Fragment) n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TWS1_9EURY similarity UNIREF
DB: UNIREF90
  • Identity: 42.0
  • Coverage: 0.0
  • Bit_score: 229
  • Evalue 6.00e+00

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Taxonomy

uncultured archaeon → Archaea

Sequences

DNA sequence
Length: 741
ATGAGCATAGTCAAACGCTTCATAACAGAATCAATCAAAAGAACAGAAATAGATGAATTTTTACAAAAAAAACTTGAACGCGCCGGGTATGGCGGAGTAAACCTATCCAAAACACCCCTGGGCACCCACGTAGTAATCTACGCCATGCGCCCAGGTTTAGTCATCGGCAGAGGCGGAGAAACCATAAAAGAACTCGCCTCAGCCCTAGAACAAAACTTCAAAGTTTCCAATCCTCAAATTTCAGTTTCAGAAATCGAATTCCCAGAATTCAACGCTCACGTGGTCGCATCACGTGTTGCCTCAGCACTAGAGAGAGGCGTTCATTTTAGACGCGCTGGTTTTTGGGCACTAAACCAAGTTATGGAAGCAGGCGCACTTGGCGCTGAAATAGTCATAAGCGGAAAACTCCGCACAGAAAGAGCACGCTTCGAAAAATTTAAAGCAGGTCACTTCCCAATAGTCGGAGAACCAGCACTACGAGCCATGAAAAAAGCTGAAGCGCACGTCCAACTAAAACCAGGCATCATCGGCGTACGAGTAAAAATCATGCCGCCAGACGCATACTTCCCCGACAAAGTAACAATCATTGAACCAGCCCCCGAAGAAGAAAAAATAACCGTTCCACAGCAAACAGTAGCTAAACCCGCAGCACAAGCAGAGCAAGCACCCCAGCCAGAGCCAGATGCAGAAGTAAACGCAACAGAAGTAACTGACAAAGCAGAAAAGGAGGCAAAAGAGTAA
PROTEIN sequence
Length: 247
MSIVKRFITESIKRTEIDEFLQKKLERAGYGGVNLSKTPLGTHVVIYAMRPGLVIGRGGETIKELASALEQNFKVSNPQISVSEIEFPEFNAHVVASRVASALERGVHFRRAGFWALNQVMEAGALGAEIVISGKLRTERARFEKFKAGHFPIVGEPALRAMKKAEAHVQLKPGIIGVRVKIMPPDAYFPDKVTIIEPAPEEEKITVPQQTVAKPAAQAEQAPQPEPDAEVNATEVTDKAEKEAKE*