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RBGRP_22

Alias: scaffold_805

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_22_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

149..1183
DNA (1035bp) protein (345aa)
coenzyme PQQ synthesis protein E Tax=RBG_13_Bathyarchaeota_46_16b_curated
radical SAM domain-containing protein
Radical SAM domain protein n=1 Tax=Methanobacterium sp. SWAN-1 RepID=F6D3Y5_METSW
RBGRP_22_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2161..2769)
DNA (609bp) protein (203aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_13_Bathyarchaeota_46_16b_curated
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5F9_9ARCH
RBGRP_22_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2800..3312)
DNA (513bp) protein (171aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
RBGRP_22_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3574..4989)
DNA (1416bp) protein (472aa)
preprotein translocase subunit; K10956 protein transport protein SEC61 subunit alpha Tax=RBG_13_Bathyarchaeota_46_16b_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5F7_9ARCH
RBGRP_22_5

Not on your lists


comp(4999..5409)
DNA (411bp) protein (137aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
large subunit ribosomal protein L15
Large subunit ribosomal protein L15 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5F6_9ARCH
RBGRP_22_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5399..5845)
DNA (447bp) protein (149aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
heat shock protein Hsp20
Heat shock protein Hsp20 n=1 Tax=Fervidicoccus fontis Kam940 RepID=I0A035_FERFK
RBGRP_22_7
unknown

Not on your lists

7156..7830
DNA (675bp) protein (225aa)

This feature has no annotations

RBGRP_22_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(7885..8373)
DNA (489bp) protein (163aa)
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_13_Bathyarchaeota_46_16b_curated
Ribosomal protein L30P (rpl30P)
50S ribosomal protein L30P n=5 Tax=Thermococcus RepID=RL30_PYRKO
RBGRP_22_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(8376..9032)
DNA (657bp) protein (219aa)
30S ribosomal protein S5 Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Fervidicoccus fontis Kam940 RepID=I0A0I3_FERFK
RBGRP_22_10

Not on your lists


comp(9029..9802)
DNA (774bp) protein (258aa)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Ribosomal protein L18P
50S ribosomal protein L18P n=8 Tax=Thermococcus RepID=RL18_PYRKO
RBGRP_22_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9804..10259)
DNA (456bp) protein (152aa)
rpl19e; 50S ribosomal protein L19; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_46_16b_curated
50S ribosomal protein L19e
Ribosomal protein L19e n=1 Tax=Methanothermus fervidus DSM 2088 RepID=E3GZD7_METFV
RBGRP_22_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10256..10807)
DNA (552bp) protein (184aa)
rpl32e; 50S ribosomal protein L32e Tax=RBG_13_Bathyarchaeota_46_16b_curated
LSU ribosomal protein L32E
50S ribosomal protein L32e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
RBGRP_22_13

Not on your lists


comp(10807..11352)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
50S ribosomal protein L6P n=1 Tax=Pyrolobus fumarii 1A RepID=G0ECG1_PYRF1
RBGRP_22_14

Not on your lists


comp(11364..11747)
DNA (384bp) protein (128aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8P
RBGRP_22_15

Not on your lists

comp(11943..12485)
DNA (543bp) protein (181aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L11e (L5p)
50S ribosomal protein L5P n=2 Tax=Thermococcus RepID=H3ZNL4_THELI
RBGRP_22_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(12478..13242)
DNA (765bp) protein (255aa)
30S ribosomal protein S4E, central domain-containing protein; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S4e n=1 Tax=Thermosphaera aggregans DSM 11486 RepID=D5U1Y2_THEAM
30S ribosomal protein S4
RBGRP_22_17

Not on your lists


comp(13245..14084)
DNA (840bp) protein (280aa)
50S ribosomal protein L24, large subunit ribosomal protein L24 {ECO:0000313|EMBL:AJS13239.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl24p; 50S ribosomal protein L24
50S ribosomal protein L24P n=2 Tax=Staphylothermus RepID=RL24_STAMF
RBGRP_22_18

Not on your lists


comp(14092..14532)
DNA (441bp) protein (147aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
50S ribosomal protein L14P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB38_ACIB4
RBGRP_22_19

Not on your lists


comp(14534..14854)
DNA (321bp) protein (107aa)
30S ribosomal protein S17, small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS13241.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
30S ribosomal protein S17P n=2 Tax=Methanopyrus kandleri AV19 RepID=RS17_METKA
RBGRP_22_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14854..15135)
DNA (282bp) protein (94aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ribonuclease P protein component 1
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. SWAN-1 RepID=F6D7K9_METSW
RBGRP_22_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(15132..15440)
DNA (309bp) protein (103aa)
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Bathyarchaeota_46_16b_curated
50S ribosomal protein L29P
50S ribosomal protein L29P n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12ZU4_METBU
RBGRP_22_22

Not on your lists


comp(15441..16181)
DNA (741bp) protein (247aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; ribosomal protein S3P Rps3p
Ribosomal protein S3, eukaryotic/archaeal type (Fragment) n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TWS1_9EURY
RBGRP_22_23

Not on your lists


comp(16182..16667)
DNA (486bp) protein (162aa)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl22p; 50S ribosomal protein L22
50S ribosomal protein L22P n=1 Tax=Methanopyrus kandleri AV19 RepID=RL22_METKA
RBGRP_22_24
unknown

Not on your lists

comp(17257..17553)
DNA (297bp) protein (99aa)

This feature has no annotations

RBGRP_22_25
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17933..18586)
DNA (654bp) protein (218aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66434.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
Putative uncharacterized protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R820_AMMDK
hypothetical protein
RBGRP_22_26
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18552..18761)
DNA (210bp) protein (70aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66433.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R821_AMMDK
RBGRP_22_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

19373..20437
DNA (1065bp) protein (355aa)
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=RBG_13_Bathyarchaeota_46_16b_curated
thiL1; thiamine-monophosphate kinase (EC:2.7.4.16)
Hydrogenase expression/formation protein HypE n=1 Tax=Sulfolobus islandicus HVE10/4 RepID=F0NP56_SULIH
RBGRP_22_28
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

comp(20456..20899)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:EMR74221.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
RBGRP_22_29
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20963..22045)
DNA (1083bp) protein (361aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RBG_13_Bathyarchaeota_46_16b_curated
hydrogenase expression/formation protein hypd
Hydrogenase expression/formation protein HypD n=1 Tax=Methanothermus fervidus DSM 2088 RepID=E3GX17_METFV
RBGRP_22_30
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(22069..22290)
DNA (222bp) protein (74aa)
hydrogenase assembly chaperone HypC/HupF Tax=RBG_13_Bathyarchaeota_46_16b_curated
hydrogenase assembly chaperone HypC/HupF
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1D2_9CREN
Displaying items 1-30 of 81 in total

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