ggKbase home page

RBGRP_53_27

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 15622..16587

Top 3 Functional Annotations

Value Algorithm Source
H/ACA RNA-protein complex component Cbf5p Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 321.0
  • Bit_score: 630
  • Evalue 1.10e-177
H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 315.0
  • Bit_score: 339
  • Evalue 1.40e-90
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri AV19 RepID=TRUB_METKA similarity UNIREF
DB: UNIREF90
  • Identity: 51.0
  • Coverage: 0.0
  • Bit_score: 324
  • Evalue 2.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Euryarchaeota_56_21_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 966
ATGCTCATAAAGGCCAAGAGAGCGATTGATTCCGGGACCGGGAAGAAGCCCCACGAGCGCACCGTCGAGGAGTTGCTCCAGGACGGTGTCGTCGTGCTCGACAAGCCATCTGGGCCGACATCTCACCAGATCACCAGCTGGGCGGGGGATATCCTGGGCGCCTCGAAGTCCGCCCACGGAGGAACCCTGGACCCGCGCGTGACGGGTGTTCTGCCCGTTGGGATCGGCAACGCGGTTCGGGCGATGGACGCGCTTCACTACGGGACCAAGGCGTATGTCGGCGTCATGAAGATGCACGGCAACGTCGACCTCAAGCGGCTTCAGGAGGTATTCAAGGAGTTCACGGGAGAGATACTCCAAACACCTCCGATGAGATCAGCTGTCAAACGCGAGAGGCGTAGCCGGACAATCGAATCGCTGAACATACTGGAAATCTCCGGACGTGACGTCCTCTTCAAAGTGGATTGCGAGGCGGGGACATACATCAGGAGCTTGTGTGTGGATATCGGAGACGCCCTAGCAACAGGAGCTCACCTGCAGGATCTCAGGAGGACCAGGGCAGGCTCACTCACCGAAGACCAGGCCGTGACGCTCCACGACCTCAAGGACGCGGTCACGGACCACAAGGGCGGCAACAGTGTGCCCCTCAGGAAGATGCTGCATCCCAAGGAGGTCCTCCTGGAGCAGATCCCGAAGATACAGATCAAGGATTCCGCCGTGGACGCGATCTGCCACGGGGCCAACCTCGCTGTGCCCGGTGTGGTCGCCCTGGACGAGGGCATCGAGAAGGGCGGCGCCGTCGCGGTCATGACCCTGAGCGGAGAGGGTGTCGGGCTCGGGACCGCGCTCATGGACTCGGAGGAGATCATGAAGCGCGCCGAGGGGTTCGCGGTGAGTGTCTCGAGGGTTCTGATGCTGAGAGGAACTTACGCCAGGATGTGGACAAGCTCGGCGGACAAGACCTAG
PROTEIN sequence
Length: 322
MLIKAKRAIDSGTGKKPHERTVEELLQDGVVVLDKPSGPTSHQITSWAGDILGASKSAHGGTLDPRVTGVLPVGIGNAVRAMDALHYGTKAYVGVMKMHGNVDLKRLQEVFKEFTGEILQTPPMRSAVKRERRSRTIESLNILEISGRDVLFKVDCEAGTYIRSLCVDIGDALATGAHLQDLRRTRAGSLTEDQAVTLHDLKDAVTDHKGGNSVPLRKMLHPKEVLLEQIPKIQIKDSAVDAICHGANLAVPGVVALDEGIEKGGAVAVMTLSGEGVGLGTALMDSEEIMKRAEGFAVSVSRVLMLRGTYARMWTSSADKT*