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RBGRP_53

Alias: scaffold_3018

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_53_1

Not on your lists


2..982
DNA (981bp) protein (327aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; Flags: Fragment;; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P
50S ribosomal protein L3P n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI7_ACIB4
RBGRP_53_2
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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987..1823
DNA (837bp) protein (279aa)
rpl4lp; 50S ribosomal protein L4P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rpl4lp; 50S ribosomal protein L4P
50S ribosomal protein L4P n=1 Tax=Archaeoglobus veneficus SNP6 RepID=F2KSV0_ARCVS
RBGRP_53_3
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


1820..2098
DNA (279bp) protein (93aa)
50S ribosomal protein L23P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
50S ribosomal protein L23P
50S ribosomal protein L23P n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IFI9_ACIB4
RBGRP_53_4
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


2110..2811
DNA (702bp) protein (234aa)
ribosomal protein L2 Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
ribosomal protein L2
50S ribosomal protein L2P n=2 Tax=Aciduliprofundum boonei T469 RepID=D3TB45_ACIB4
RBGRP_53_5
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


2815..3483
DNA (669bp) protein (223aa)
SSU ribosomal protein S15e (S19p) Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
SSU ribosomal protein S15e (S19p)
Ribosomal protein S19 n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB44_ACIB4
RBGRP_53_6
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


3493..3942
DNA (450bp) protein (150aa)
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal)
50S ribosomal protein L22P n=7 Tax=Pyrococcus RepID=RL22_PYRAB
RBGRP_53_7
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


3963..4985
DNA (1023bp) protein (341aa)
rps3p; 30S ribosomal protein S3P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rps3p; 30S ribosomal protein S3P
30S ribosomal protein S3 n=1 Tax=Methanocella paludicola SANAE RepID=D1Z0S6_METPS
RBGRP_53_8
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


4991..5287
DNA (297bp) protein (99aa)
50S ribosomal protein L29P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
LSU ribosomal protein L35e (L29p)
50S ribosomal protein L29P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB41_ACIB4
RBGRP_53_9
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

5287..5580
DNA (294bp) protein (98aa)
translation initiation factor Sui1 Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
translation initiation factor Sui1
Protein translation factor SUI1 homolog n=2 Tax=Methanobacterium RepID=F0TB82_METSL
RBGRP_53_10
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

5594..5857
DNA (264bp) protein (88aa)
RNase P/RNase MRP subunit p29 (EC:3.1.26.5) Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
RNase P/RNase MRP subunit p29 (EC:3.1.26.5)
RNase P/RNase MRP subunit p29 n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T1N1_9EURY
RBGRP_53_11
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


5869..6231
DNA (363bp) protein (121aa)
archaeal ribosomal protein S17P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
archaeal ribosomal protein S17P
30S ribosomal protein S17P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB39_ACIB4
RBGRP_53_12
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


6237..6635
DNA (399bp) protein (133aa)
LSU ribosomal protein L14P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
LSU ribosomal protein L14P
50S ribosomal protein L14P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB38_ACIB4
RBGRP_53_13
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


6645..7019
DNA (375bp) protein (125aa)
rpl24p; 50S ribosomal protein L24P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rpl24p; 50S ribosomal protein L24P
50S ribosomal protein L24P n=1 Tax=Aeropyrum pernix K1 RepID=RL24_AERPE
RBGRP_53_14
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

7026..7736
DNA (711bp) protein (237aa)
30S ribosomal protein S4e Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
30S ribosomal protein S4e
30S ribosomal protein S4e n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB36_ACIB4
RBGRP_53_15
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


7733..8242
DNA (510bp) protein (170aa)
LSU ribosomal protein L5P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rpl5p; 50S ribosomal protein L5P
50S ribosomal protein L5P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB35_ACIB4
RBGRP_53_16
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


8397..8786
DNA (390bp) protein (130aa)
rps8p; 30S ribosomal protein S8P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 n=1 Tax=Methanopyrus kandleri AV19 RepID=RS8_METKA
RBGRP_53_17

Not on your lists


8797..9336
DNA (540bp) protein (180aa)
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
archaeal ribosomal protein L6P
50S ribosomal protein L6P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB32_ACIB4
RBGRP_53_18
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

9342..10139
DNA (798bp) protein (266aa)
LSU ribosomal protein L32e Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
LSU ribosomal protein L32e
50S ribosomal protein L32e n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBI2_ACIB4
RBGRP_53_19
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

10143..10592
DNA (450bp) protein (150aa)
rpl19e; 50S ribosomal protein L19e Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rpl19e; 50S ribosomal protein L19e
Ribosomal protein L19e n=1 Tax=Methanosalsum zhilinae DSM 4017 RepID=F7XLT9_METZD
RBGRP_53_20
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


10598..11107
DNA (510bp) protein (170aa)
rpl18p; 50S ribosomal protein L18P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
50S ribosomal protein L18P
50S ribosomal protein L18P n=1 Tax=Methanothermus fervidus DSM 2088 RepID=E3GZD8_METFV
RBGRP_53_21
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


11100..11822
DNA (723bp) protein (241aa)
rps5p; 30S ribosomal protein S5P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rps5; 30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IBH9_ACIB4
RBGRP_53_22
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


11825..12313
DNA (489bp) protein (163aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rpl30p; 50S ribosomal protein L30P
50S ribosomal protein L30P n=1 Tax=Methanothermobacter marburgensis str. Marburg RepID=D9PV61_METTM
RBGRP_53_23
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


12314..12739
DNA (426bp) protein (142aa)
rpl15p; 50S ribosomal protein L15P Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rpl15p; 50S ribosomal protein L15P
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus DSM 2088 RepID=E3GZE1_METFV
RBGRP_53_24
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

12789..14366
DNA (1578bp) protein (526aa)
Preprotein translocase secY subunit Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
Preprotein translocase secY subunit
Protein translocase subunit SecY n=7 Tax=Aciduliprofundum RepID=B5IBH7_ACIB4
RBGRP_53_25
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

14371..15087
DNA (717bp) protein (239aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei T469 RepID=D3TB23_ACIB4
RBGRP_53_26
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

15084..15650
DNA (567bp) protein (189aa)
cytidylate kinase, putative Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
cytidylate kinase, putative
Cytidylate kinase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBH4_ACIB4
RBGRP_53_27
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

15622..16587
DNA (966bp) protein (322aa)
H/ACA RNA-protein complex component Cbf5p Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
H/ACA RNA-protein complex component Cbf5p
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri AV19 RepID=TRUB_METKA
RBGRP_53_28
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(16584..17552)
DNA (969bp) protein (323aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella arvoryzae MRE50 RepID=Q0W2H0_UNCMA
RBGRP_53_29
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(17592..18158)
DNA (567bp) protein (189aa)
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase implicated in signal transduction-like protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9Q8_ACIB4
RBGRP_53_30
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(18155..20446)
DNA (2292bp) protein (764aa)
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Aster yellows witches'-broom phytoplasma AYWB RepID=Q2NJC3_AYWBP
Displaying items 1-30 of 43 in total

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