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RBGRP_62_20

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: comp(17557..17976)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor Tax=RBG_16_Chloroflexi_63_12_curated UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 144.0
  • Bit_score: 137
  • Evalue 1.30e-29
RNA polymerase sigma factor n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B5K1_HERA2 similarity UNIREF
DB: UNIREF90
  • Identity: 48.0
  • Coverage: 0.0
  • Bit_score: 119
  • Evalue 9.00e+00
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 134.0
  • Bit_score: 118
  • Evalue 2.10e-24

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Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 420
GTGCGAGCGTTCCGATCGCTGGATCGGTTTGATTCGACGCGTCCGCTGCGACCGTGGTTGATGCGGATCACGATGAACCAGGCCCGCAATCGGAGACGCTCGGTCGGGCGCTACCTCGCCGCCGTCGAGCGCTGGTTTCGCCTGGAGGGCCGGCTGGGGACCCCATCCGGCGCATCGCCGGAATCGCCGCTCACGCACGACGACGCGGCGGTGCTGCGCGAGGCGGTGAGCAAATTGAACCGGCGCGATCAGGAAGTCGTCTACTTCAGGTTCTTCCTGGGCCTCGGAGAAACGGAGACGGCCGCAACGCTGGCAGTCCCGGAAGGCACGGTGAAATCGAGGCTGAGTCGTGCCCTGGCGAGGCTTCGAATCATCGTCGAGCGCGAGTACCCCGGCTTGCAGGAGGCGCTGAGGGCATGA
PROTEIN sequence
Length: 140
VRAFRSLDRFDSTRPLRPWLMRITMNQARNRRRSVGRYLAAVERWFRLEGRLGTPSGASPESPLTHDDAAVLREAVSKLNRRDQEVVYFRFFLGLGETETAATLAVPEGTVKSRLSRALARLRIIVEREYPGLQEALRA*