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RBGRP_62

Alias: scaffold_3698

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_62_1
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1069)
DNA (1068bp) protein (356aa)
major facilitator superfamily protein Tax=RBG_16_Gammaproteobacteria_66_13_curated
major facilitator superfamily MFS_1
Major facilitator family transporter n=1 Tax=Sutterella wadsworthensis 3_1_45B RepID=E7H3Y3_9BURK
RBGRP_62_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1066..1908)
DNA (843bp) protein (281aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5E2_ANATU
RBGRP_62_3
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2146..2724)
DNA (579bp) protein (193aa)
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-); K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RBG_16_Gammaproteobacteria_66_13_curated
ruvA; Holliday junction DNA helicase RuvA
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=RUVA_HERA2
RBGRP_62_4
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2809..3345)
DNA (537bp) protein (179aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RBG_16_Gammaproteobacteria_66_13_curated
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Roseiflexus sp. RS-1 RepID=RUVC_ROSS1
RBGRP_62_5
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3409..4164)
DNA (756bp) protein (252aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_66_13_curated
hypothetical protein
Probable transcriptional regulatory protein ANT_13730 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4N7_ANATU
RBGRP_62_6
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4309..5079)
DNA (771bp) protein (257aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_66_13_curated
Uncharacterized conserved protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D486_PELTS
hypothetical protein
RBGRP_62_7
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5258..6253)
DNA (996bp) protein (332aa)
putative zinc-containing alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=RBG_16_Gammaproteobacteria_66_13_curated
alcohol dehydrogenase (EC:1.1.1.1)
Putative alcohol dehydrogenase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME6_9BACT
RBGRP_62_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6273..7367)
DNA (1095bp) protein (365aa)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_16_Gammaproteobacteria_66_13_curated
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4I3_SPHTD
RBGRP_62_9
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7482..8765
DNA (1284bp) protein (428aa)
GAF sensor signal transduction histidine kinase Tax=RBG_16_Gammaproteobacteria_66_13_curated
GAF sensor signal transduction histidine kinase
GAF sensor signal transduction histidine kinase n=1 Tax=Methanocella conradii HZ254 RepID=H8IAD2_METCZ
RBGRP_62_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

9160..10812
DNA (1653bp) protein (551aa)
hutU; urocanate hydratase
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I6R2_CALAS
RBGRP_62_11
unknown

Not on your lists

comp(10944..11162)
DNA (219bp) protein (73aa)

This feature has no annotations

RBGRP_62_12
unknown

Not on your lists

comp(11199..11585)
DNA (387bp) protein (129aa)

This feature has no annotations

RBGRP_62_13
unknown

Not on your lists

comp(11587..11736)
DNA (150bp) protein (50aa)

This feature has no annotations

RBGRP_62_14
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(12029..13390)
DNA (1362bp) protein (454aa)
kamA; lysine 2,3-aminomutase (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2] Tax=RBG_13_Chloroflexi_68_17_curated
kamA; lysine 2,3-aminomutase (EC:5.4.3.2)
Lysine 2,3-aminomutase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZH9_ANATU
RBGRP_62_15
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13519..14733)
DNA (1215bp) protein (405aa)
putative D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative D-alanine--D-alanine ligase (EC:6.3.2.4)
Putative D-alanine--D-alanine ligase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1N6_ANATU
RBGRP_62_16
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(14848..15081)
DNA (234bp) protein (78aa)
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
RBGRP_62_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(15091..15849)
DNA (759bp) protein (253aa)
two component transcriptional regulator Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
two component transcriptional regulator
Two component transcriptional regulator, winged helix family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFS9_9CHLR
RBGRP_62_18
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15924..16754)
DNA (831bp) protein (277aa)
seg 140..159 Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
RBGRP_62_19
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(16781..17560)
DNA (780bp) protein (260aa)
transmembrane_regions 50..72 Tax=RBG_16_Chloroflexi_54_18_curated
RBGRP_62_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(17557..17976)
DNA (420bp) protein (140aa)
ECF subfamily RNA polymerase sigma-24 factor Tax=RBG_16_Chloroflexi_63_12_curated
RNA polymerase sigma factor n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B5K1_HERA2
ECF subfamily RNA polymerase sigma-24 factor
RBGRP_62_21
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

18455..19063
DNA (609bp) protein (203aa)
cdsA; phosphatidate cytidylyltransferase Tax=RBG_13_Chloroflexi_66_10_curated
cdsA; phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase n=2 Tax=Acaryochloris RepID=B0CDR8_ACAM1
RBGRP_62_22
unknown

Not on your lists

comp(19081..19269)
DNA (189bp) protein (63aa)

This feature has no annotations

RBGRP_62_23
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(19233..20684)
DNA (1452bp) protein (484aa)
hypothetical protein; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RBG_13_Chloroflexi_68_17_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3Q8_ANATU
RBGRP_62_24

Not on your lists


comp(20763..21155)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S01H1_S21654 {ECO:0000313|EMBL:GAG15300.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3Q5_ANATU
RBGRP_62_25
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(21177..21644)
DNA (468bp) protein (156aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
50S ribosomal protein L13
50S ribosomal protein L13 n=1 Tax=Truepera radiovictrix DSM 17093 RepID=D7CWL0_TRURR
RBGRP_62_26
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(21648..22409)
DNA (762bp) protein (254aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3Q3_ANATU
RBGRP_62_27
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists


comp(22461..22838)
DNA (378bp) protein (126aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_13_Chloroflexi_68_17_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3Q2_ANATU
RBGRP_62_28
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(22835..23821)
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_68_17_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3Q1_ANATU
RBGRP_62_29
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(23850..24488)
DNA (639bp) protein (213aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3Q0_ANATU
RBGRP_62_30
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(24513..24923)
DNA (411bp) protein (137aa)
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3P9_ANATU
Displaying items 1-30 of 57 in total

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