ggKbase home page
Advanced Search
Search Help

RBGRP_108_2

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 834..4922

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 999.99
  • Bit_score: 2071
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 999.99
  • Bit_score: 2071
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5N7_PIRSD similarity UNIREF
DB: UNIREF90
  • Identity: 78.0
  • Coverage: 0.0
  • Bit_score: 2070
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 4089
ATGAGCTTCGGTGACAGCGCGAGCTACGACCGGATTAACGACTATGCCTCGGTCAAGATCAGCCTGGCGCGACCCCACGATATCCGGAGTTGGTCGTTCGGTGAAGTCAAGAAGCCGGAAACGATCAACTACCGCACGTACCGCCCGGAGAAAGACGGGCTCTTCTGCGAACGGATTTTTGGCCCGGAGAAGGATTGGGAATGCTCCTGCGGTAAGTACCGGGGCATGAAGTACAAGGGAATGATCTGTGACCGCTGCGGCGTGAAAGTCACGCACAGCCGGGTGCGGCGCAAGCGCATGGGGCATATCGAACTGGCCGCGCCGGCCGTCCACATCTGGTTCTTCAAGGCCATGCCCAGCCGGCTGGGCAGCCTGCTGGCGATGAAGACCACGAGCCTGGAAAAGGTGATCTACTTCCAGGACTACGTGGTGATTGATCCCCGCGATACGGCGCTCAAACCGCAGCAGCTCTTGACCGAAGAGGAGTACCGTTCCGCGCGCGAGCAATATGGCGACGGTGCTTTCGAGGCCGACATGGGGGCCGAAGCGATTCGCAAGCTGCTGCGGAATCTGGACCTGGTCACGCTATCGGAGCAATTGCGGCGCGAGTTGAAGGAGACCGGCGCGAAGCAGAAAGCCAAGGACCTGATCAACCGGCTGAAAACCGTCGAGGCGATTCGCGACAGCGACAACAAGCCCGAATGGATGGTCCTCGATGTCATCCCGGTGATCCCGCCGGATCTCCGGCCGTTGGTCCTGCTCGACTCGGGCAACTTCGCGACCAGCGATCTGAATGACCTGTACCGCCGGATTATCAACCGCAACAACCGGCTCAAGAAGCTGGTCGACCTCAACGCGCCCGAAGTGATCATCCGCAACGAGAAACGCATGCTCCAGCAATCGGTTGACGCGCTATTCGACAACAACCGGTGTAAACGGCCGGTGCTCGGCAGCAGCAACCGCCCGTTGAAATCGCTGACCGACATGATCAAGGGCAAGCAAGGGCGGTTCCGCGAGAACCTGCTTGGCAAGCGCGTCGACTACTCGGCCCGCAGCGTCATCGTGGTCGGCCCGAGCCTGCGCCTGCACCAGTGCGGGCTGCCCAAGAAGATCGCGCTGGAATTGTACCAGCCGTTCATCATCCGGCGGCTCAAGGAACTGGGACACGCCGATACGATCAAGAGTGCCAAGAAGATGCTGGAGCGGAAGGACGAGGAGGTGTGGGATATCCTCGAGGAAGTGATCCGCAATCATCCGGTGCTGCTGAACCGGGCGCCAACGCTTCATCGCATGGGGATCCAGGCGTTTGCCCCGGTGTTGGTCGAGGGCAACGCGATCCAACTCCACCCGCTCGTGTGCAAGGGCTTTAACGCCGACTTCGATGGCGATCAGATGGCAGTCCACCTGCCGCTGTCGATCGAAGCCCAGGTCGAAGCCCATACGCTGATGATGTCCACCCACAACATCTTCAGTCCGGCCAACGGGTCCCCCATCATCAGTCCCTCGCAGGACGTGGTCATGGGCTGCTACTACCTGACGATGCAGGTGCCCCAGGCGCGTGGGGATGGGATGGTGTTTGGCACCCTGGAAGAGGTCGAAATGGCCTACGCCGCCGGGGTCGTGGCGACCCATGCTCGGATCAAGGTCCGGCTGCCCCACCAGCGGCAACTCAAGGCGGAGCTGCTGGCCGAACCGCGCCGCAGTGGGCTGATTGAGACGACCGTCGGGCGCGTGCTGTTCAATAACGTGTTGCCTGCTGGGATGCCGTTCTACGATGTGCCGATGCGCTCCAGCGGGCTAGCCCGGGTCATTTCCGACTGCTATGAGAACCTGGGGCGCCGCGCCACCATCGATTTGCTGGACGACATGAACCGGCTGGGCTTCCGCGAGAGCACGCGCAGCGGGCTGTCGTTTGCCACCGACGACCTGATCACCCCGGAAAGCAAGAGCCGCATCATCGGCAATGCCGAGCGCAACGTGCTCAAGATCCTCAAGCTGTACCAGCGCGGCATCATCACCGAAGGGGAGCGCTACAACCAAGTCTTGGATGCCTGGACGCACGCCCGCGAGCAGATCACGACCGAAATGATGGCCGCCCTGGAACACGACTTCCGCCCCGGCGGCTATGTCAACCCAATCTTCTTGATGGCCCACTCGGGGGCGCGGGGTGGCGTCGAGCAGATTCGACAGTTGGCCGGGATGCGTGGCCTGATGGCGAAACCGTCGGGCAAGATTATTGAAACACCGATCAAGGCCAACTTCCGCGAGGGCCTGTCGGTGCTCGAGTACTTCAGTTCGACCCACGGCGCTCGTAAGGGCTTGGCCGACACCGCGCTGAAGACGGCCGATTCCGGTTACTTGACCCGCAAGCTGGCCGACGTGGCCCAGAATGTCGTGGTGACCCTGCACGACTGCGGTACCACCCAGGGCATCACGAAGGGGGTGATCTACCGGGGCGAAAAGGTCGAAGTCCGTCTGTCCGATTCCATCCGCGGTCGGGTCAGTCGCTCGAACATCGTCAATCCGGTGACCGACGAGGTGATCGTGCGCGAAAACGAGCTCATCACGCCGGAGATCGCCCGCCGGATTGAGGAATTGGGCCTGGAGAAGATCCAGGTGCGGAGCCCGATGACCTGCAACGCACCACTCGGAGTGTGCCGCTGCTGCTATGGCATGGACCTGTCGACCGGGGCGCTGGTCGAAGAGGGCATGGCCGTGGGCATCATTGCCGCCCAGAGCATTGGCGAACCGGGCACCCAGTTGACGATGCGCACGTTCCACATTGGTGGCACCGCCGCCCGCGCGGTGGAGGAGAGCGAAATCCGCGCCAAGAAGGACGGCGTGGTGAAATACACCCGCCTGGAGGTGGTCATCAACGAGAAGGGCGACCGGGTGGTGCTGACCCGCAACGGCGAAATCCAGCTCGTCGACGACCGCGGCCGCGAATTGGAGAAGTACGAAGTCCCCACCGGCGCGTTCCTGCAAGTCGACGAAAATGCGGTGGTCAAGTCCGGCACGGTTCTCTGTCAATGGGACCCGCACGCGATTCCGATTCTAGCCGAAACGGGCGGTAAGGTCCGCTACGAGGACGTGATCGAAGGGGATACGCTGCGGATCGAGAAAGATCCCAGCGGCCACGTTCGCCGGATGATCATGGAGCATAAAGGGGATCTGCACCCGCAGGTGGTCGTCGAAGACGACCAGTCGGGCAAGATCCTCGACTTCTATTACCTCCCGGAACGGGCCCACATCGAAGTGGAGGAAGGGGATATCATCGCGCCGGGTACGCTGATCGGCAAAACGCCGCGCGAGGTCACTGGCACTCAGGATATCACCGGCGGACTGCCCCGGGTAACCGAGATCTTCGAAGCCCGCAAGCCCAAAGAGCCGGCGGTGATCGCCGAAGTGGACGGGGTCGTGGAATTGCTCGGCGAGAAGCGCCGCGGCAAGCGGTCGCTGGTCGTCCGCAGCGAAAGTGGCATCGAACGCGAACACCTCGTCTCGCACGGCAAGCACCTCCGCGTGCACGCCGGCGACTTCGTTCGCGCGGGGGACGCGCTGGTCGACGGCCCCCTGGTGCCGCACGACATCCTGCGGATTTCGGGTGAAGAGGCCGTCCAACAGTACCTGACGCGGGAGATTCAGAATGTGTACCGCAGCCAGCGCGTCGAGATCAACGACAAACACATCGAAATCATCGTCGCGCAGATGCTGCGCAAGGTCCGCGTCGAGTCGCCCGGCGATACGAACTTGTTGCCGGGCAGCGTGATGGATAAGTTCGAATTCCGCACGGCGAACTCGAGTCTCGCCGATTGCCTGAAAATCACCGAGAAAAACGACAGCGAATTTGAGCCGGGGACGATCGTGCCGAAGGATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAAGGGCGTCAAGCCCAGGCCGGCGACCGCGAGTACCCAGCTGCTTGGCATCACCAAGGCGGCCGTGCAGAGCTCGAGCTTCATTTCGGCGGCCAGCTTCCAGGAGACCACCAAGGTGCTCACGGAAGCCGCCCTCGCCGGCCGCATCGACCGCCTCGTAG
PROTEIN sequence
Length: 1363
MSFGDSASYDRINDYASVKISLARPHDIRSWSFGEVKKPETINYRTYRPEKDGLFCERIFGPEKDWECSCGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPAVHIWFFKAMPSRLGSLLAMKTTSLEKVIYFQDYVVIDPRDTALKPQQLLTEEEYRSAREQYGDGAFEADMGAEAIRKLLRNLDLVTLSEQLRRELKETGAKQKAKDLINRLKTVEAIRDSDNKPEWMVLDVIPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLKKLVDLNAPEVIIRNEKRMLQQSVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPSLRLHQCGLPKKIALELYQPFIIRRLKELGHADTIKSAKKMLERKDEEVWDILEEVIRNHPVLLNRAPTLHRMGIQAFAPVLVEGNAIQLHPLVCKGFNADFDGDQMAVHLPLSIEAQVEAHTLMMSTHNIFSPANGSPIISPSQDVVMGCYYLTMQVPQARGDGMVFGTLEEVEMAYAAGVVATHARIKVRLPHQRQLKAELLAEPRRSGLIETTVGRVLFNNVLPAGMPFYDVPMRSSGLARVISDCYENLGRRATIDLLDDMNRLGFRESTRSGLSFATDDLITPESKSRIIGNAERNVLKILKLYQRGIITEGERYNQVLDAWTHAREQITTEMMAALEHDFRPGGYVNPIFLMAHSGARGGVEQIRQLAGMRGLMAKPSGKIIETPIKANFREGLSVLEYFSSTHGARKGLADTALKTADSGYLTRKLADVAQNVVVTLHDCGTTQGITKGVIYRGEKVEVRLSDSIRGRVSRSNIVNPVTDEVIVRENELITPEIARRIEELGLEKIQVRSPMTCNAPLGVCRCCYGMDLSTGALVEEGMAVGIIAAQSIGEPGTQLTMRTFHIGGTAARAVEESEIRAKKDGVVKYTRLEVVINEKGDRVVLTRNGEIQLVDDRGRELEKYEVPTGAFLQVDENAVVKSGTVLCQWDPHAIPILAETGGKVRYEDVIEGDTLRIEKDPSGHVRRMIMEHKGDLHPQVVVEDDQSGKILDFYYLPERAHIEVEEGDIIAPGTLIGKTPREVTGTQDITGGLPRVTEIFEARKPKEPAVIAEVDGVVELLGEKRRGKRSLVVRSESGIEREHLVSHGKHLRVHAGDFVRAGDALVDGPLVPHDILRISGEEAVQQYLTREIQNVYRSQRVEINDKHIEIIVAQMLRKVRVESPGDTNLLPGSVMDKFEFRTANSSLADCLKITEKNDSEFEPGTIVPKDXXXXXXXXXXXXXXXXXPRASSPGRRPRVPSCLASPRRPCRARASFRRPASRRPPRCSRKPPSPAASTAS*