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RBGRP_159_13

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 11215..13938

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 526.0
  • Bit_score: 929
  • Evalue 8.70e-268
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 526.0
  • Bit_score: 911
  • Evalue 7.20e-262
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=E3I7E3_RHOVT similarity UNIREF
DB: UNIREF90
  • Identity: 86.0
  • Coverage: 0.0
  • Bit_score: 902
  • Evalue 1.00e+00

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2724
ATGGAAAACCAATACCGCATCGGCCTGCTGCGCATGGAGCGTGCGATCAAGGAGCGCATGTCGTCGGTCGATATCGACACGGTGATGCCGCAGGACCTGATCAACGCCAAGCCGGCGGCCGCCGCGGTGCGCGAGTTCTTCGGCTCCTCGCAGCTCTCGCAGTTCATGGACCAGACCAATCCGCTGTCGGAGATCACCCACAAGCGGCGCCTGTCGGCGCTTGGCCCGGGCGGTCTGACGCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCGACGCATTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGGCCGAATATCGGTCTGATCAATTCGCTCGCGACCTTCGCGCGGGTGAACAAATACGGCTTCGTCGAAACGCCCTATCGCAAGGTCAAGGACGGCCGCGTCACCGACGAGGTCATCTACCTGTCGGCGATGGAGGAAAGCCGCAACGCGGTGGCGCAAGCCAATGCCGCGATCGATGGCCGTGGCCGCTTCACCGAAGACCTGATCGTGTGTCGCCAGGCCGGCGACGTGCATCTGGTTCCGCGCGACAAGGTCGACTTCATGGACGTGTCGCCGAAACAGCTGGTGTCGGTGGCGGCGGCGCTCATTCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCGCTGGTTCGCGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAAGGCGTGGTCGCCCGCGACTCGGGCGCCTCGATTTCCGCGCGCCGTACCGGCATCGTCGACCAGGTCGACGCCACCCGTATCGTGGTGCGCGCCACCGGCGAGACCGACCCGACCAAGCCGGGCGTCGATATCTACCGGCTGATGAAGTATCAGCGCTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGATCGCGTCGACAAGGCCGACATCATCGCCGACGGCCCCTCGACCGATCTCGGCGAGCTCGCGCTCGGCCGCAACGTGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGATTCGATCCTGCTCTCCGAGCGGATCGTGAAAGACGACGTGTTCACGTCCATTCACATCGAGGAATTCGAGGTGATGGCGCGCGACACCAAGCTCGGCCCCGAGGAAATTACCCGCGACATCCCGAACGTTTCGGAAGAGGCGCTCAAGAATCTGGACGAAGCGGGCATCGTCTATATCGGCGCCGAAGTGCACGCCGGCGACATCCTGGTCGGCAAGATCACGCCCAAGGGCGAAAGCCCGATGACGCCGGAAGAAAAACTGTTGCGCGCCATCTTCGGCGAGAAGGCTTCCGACGTGCGCGACACCTCATTGCGGGTGCCGCCGGGCGTGCAGGGTACCGTGGTCGAAGTGCGCGTGTTTAACCGCCATGGCGTCGAGAAGGACGAGCGCGCGCTCGCCATCGAGCGCGAGGAGATCGAACGGCTCGCCAAGGACCGCGACGACGAGCAGGCGATCCTCGATCGCAACGTCTATGGCCGTCTGGCCGAGTTGCTGGAAGGCCGCCAGGGCATCGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCCGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCCGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTATCGCGCATCGTGCCGATCGAGGACATGCCGTTCCTCGAAGACGGCACCCATGCCGACATCGTGCTCAATCCGCTCGGCGTGCCGAGCCGGATGAACGTCGGTCAGATTTTGGAAACCCATCTCGGCTGGGCTTGCGCCGGCCTGGGGATCAAGATCGGGCAGGCGGTCGATGCCTATAACCTCAAGCACGACGCGCGTCCGCTCAAGGACATGCTCAAGAAGGTCTATGGCGACGACGAGACCATCAAGTCGCTGAGCGAAGAGGGTCTGATCGAGCTTGGCGGCAACCTTCGGCATGGCGTGCCGATCGCGACGCCGGTGTTCGACGGCGCCAAGGAGGCCGACATCGAGAAAATGCTCGACCTCGCCGGCCTCGACCACTCCGGCCAGGTCAACGTGTTCGACGGCCGCACCGGCGAGGTGTTCGATCGCAAGGTGACGGTCGGCTACATCTACATGCTCAAGCTGCACCATCTGGTGGACGACAAGATCCACGCCCGTTCGATCGGTCCGTACTCGCTGGTCACCCAGCAGCCGCTCGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAAGTGTGGGCGCTCGAAGCCTACGGCGCGGCTTACACGCTGCAGGAAATGCTCACCGTGAAGTCGGACGACGTCGCCGGCCGTACCAAGGTGTACGAGGCGATCGTGCGCGGCGACGACACGTTCGAAGCGGGCATTCCCGAAAGCTTCAACGTGCTGGTCAAGGAAATGCGGTCGCTCGGCCTCAATGTCGACCTGCACAATTCCAAGCAGCAGGGGCGCGGAGGCGGCGAGACGGCGGAAGCCGCCGAATAA
PROTEIN sequence
Length: 908
MENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPYRKVKDGRVTDEVIYLSAMEESRNAVAQANAAIDGRGRFTEDLIVCRQAGDVHLVPRDKVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSGASISARRTGIVDQVDATRIVVRATGETDPTKPGVDIYRLMKYQRSNQNTCINQRPLVKVGDRVDKADIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVHAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTVVEVRVFNRHGVEKDERALAIEREEIERLAKDRDDEQAILDRNVYGRLAELLEGRQGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACAGLGIKIGQAVDAYNLKHDARPLKDMLKKVYGDDETIKSLSEEGLIELGGNLRHGVPIATPVFDGAKEADIEKMLDLAGLDHSGQVNVFDGRTGEVFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKQQGRGGGETAEAAE*