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RBGRP_159

Alias: scaffold_75077

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_159_1
unknown

Not on your lists

comp(516..794)
DNA (279bp) protein (93aa)

This feature has no annotations

RBGRP_159_2
unknown

Not on your lists

977..1378
DNA (402bp) protein (134aa)

This feature has no annotations

RBGRP_159_3
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1521..2366)
DNA (846bp) protein (282aa)
tRNA/rRNA metyltransferase
tRNA/rRNA metyltransferase {ECO:0000313|EMBL:BAL76031.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
tRNA/rRNA metyltransferase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5J4_9BRAD
RBGRP_159_4
unknown

Not on your lists

3325..3495
DNA (171bp) protein (57aa)

This feature has no annotations

RBGRP_159_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3538..3732
DNA (195bp) protein (65aa)
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broome
secE; preprotein translocase subunit SecE
Protein translocase subunit secE/sec61 gamma n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07KJ5_RHOP5
RBGRP_159_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4025..4369
DNA (345bp) protein (115aa)
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobact
Transcription antitermination protein nusG n=1 Tax=Rhodovulum sp. PH10 RepID=J5PFY0_9RHOB
nusG; transcription antitermination protein NusG
RBGRP_159_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4539..4910
DNA (372bp) protein (124aa)
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha car
50S ribosomal protein L11 n=26 Tax=Bradyrhizobiaceae RepID=RL11_BRAJA
RBGRP_159_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4966..5658
DNA (693bp) protein (231aa)
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 n=17 Tax=Bradyrhizobiaceae RepID=RL1_BRAJA
RBGRP_159_9
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6021..7880
DNA (1860bp) protein (620aa)
OmpA/MotB protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028A3AE2
OmpA family protein
OmpA family protein {ECO:0000313|EMBL:EKF75074.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongden
RBGRP_159_10
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8610..9212
DNA (603bp) protein (201aa)
50S ribosomal protein L10 n=6 Tax=Bradyrhizobium RepID=RL10_BRASB
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
RBGRP_159_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9170..9541
DNA (372bp) protein (124aa)
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
50S ribosomal protein L7/L12 n=11 Tax=Rhizobiales RepID=RL7_METS4
RBGRP_159_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9818..11215
DNA (1398bp) protein (466aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodovulum sp. PH10 RepID=J6UG37_9RHOB
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
RBGRP_159_13
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11215..13938
DNA (2724bp) protein (908aa)
rpoB; DNA-directed RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=E3I7E3_RHOVT
RBGRP_159_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14102..18274
DNA (4173bp) protein (1391aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=26 Tax=Bradyrhizobiaceae RepID=RPOC_RHOPA
RBGRP_159_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18840..19193
DNA (354bp) protein (118aa)
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.
30S ribosomal protein S12
30S ribosomal protein S12 n=47 Tax=Alphaproteobacteria RepID=RS12_BRASB
RBGRP_159_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19275..19745
DNA (471bp) protein (157aa)
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
30S ribosomal protein S7 n=2 Tax=Bradyrhizobiaceae RepID=D6VAE8_9BRAD
RBGRP_159_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20066..20431
DNA (366bp) protein (122aa)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
fusA; elongation factor G
Elongation factor G n=1 Tax=Rhodovulum sp. PH10 RepID=J6LH73_9RHOB
RBGRP_159_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20400..21848
DNA (1449bp) protein (483aa)
fusA; elongation factor G
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
Elongation factor G n=1 Tax=Rhodovulum sp. PH10 RepID=J6LH73_9RHOB
RBGRP_159_19
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21870..23066
DNA (1197bp) protein (399aa)
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacter
Elongation factor Tu n=2 Tax=Alphaproteobacteria RepID=J5PPS5_9RHOB
RBGRP_159_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23150..23458
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
30S ribosomal protein S10 n=31 Tax=Alphaproteobacteria RepID=RS10_BRAJA
RBGRP_159_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23479..24225
DNA (747bp) protein (249aa)
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 n=11 Tax=Bradyrhizobiaceae RepID=RL3_NITWN
RBGRP_159_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24227..24847
DNA (621bp) protein (207aa)
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomo
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 n=4 Tax=Rhodopseudomonas palustris RepID=RL4_RHOP2
RBGRP_159_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25142..25975
DNA (834bp) protein (278aa)
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carb
50S ribosomal protein L2 n=9 Tax=Bradyrhizobiaceae RepID=RL2_OLICO
RBGRP_159_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25987..26328
DNA (342bp) protein (114aa)
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lot
30S ribosomal protein S19
Ribosomal protein S19 n=1 Tax=Starkeya novella DSM 506 RepID=D7A957_STAND
RBGRP_159_25
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26346..26738
DNA (393bp) protein (131aa)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
50S ribosomal protein L22 n=1 Tax=Rhodovulum sp. PH10 RepID=J6J949_9RHOB
rplV; 50S ribosomal protein L22
RBGRP_159_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26751..26984
DNA (234bp) protein (78aa)
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (s
30S ribosomal protein S3 n=3 Tax=Xanthobacteraceae RepID=RS3_XANP2
RBGRP_159_27
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27289..27459
DNA (171bp) protein (57aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=3 Tax=Bradyrhizobiaceae RepID=RS3_OLICO
RBGRP_159_28
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27481..27894
DNA (414bp) protein (138aa)
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyr
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=23 Tax=Bradyrhizobiaceae RepID=RL16_BRASB
RBGRP_159_29
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27900..28214
DNA (315bp) protein (105aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Alphaproteobacteria_64_48_curated
50S ribosomal protein L29 n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G7G7_9RHIZ
50S ribosomal protein L29
RBGRP_159_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


28225..28476
DNA (252bp) protein (84aa)
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
30S ribosomal protein S17 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UF18_9RHOB
Displaying items 1-30 of 32 in total

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