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RBGRP_159_14

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 14102..18274

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 916.0
  • Bit_score: 1422
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 914.0
  • Bit_score: 1389
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=26 Tax=Bradyrhizobiaceae RepID=RPOC_RHOPA similarity UNIREF
DB: UNIREF90
  • Identity: 75.0
  • Coverage: 0.0
  • Bit_score: 1380
  • Evalue 0.0

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4173
ATGAACCAAGAGATCATGAATCTTTTCAGCCCGCAGGTGCCGGCTCAGGTCTTCGACCAGATCCGGATTTCGATCGCGAGCCCGGAAAAGATTCTGTCGTGGTCCTACGGCGAAATCAAAAAGCCGGAAACGATCAACTACCGGACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCGCGCATCTTCGGGCCGATCAAGGATTACGAGTGCTTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCATCATCTGCGAGAAGTGCTCGGTCGAGGTCACGCTGTCGCGCGTGCGGCGCGAGCGCATGGGCCATATCGAATTGGCCGCGCCGGTCGCCCATATCTGGTTCCTGAAGTCGCTGCCGAGCCGCATCGGCCTGCTGCTCGACATGACGCTGAAGGATCTCGAGCGCATCCTGTATTTCGAATACTACGTCGTGCTTGAGCCGGGCCTCACCCCGCTCAAGGACCGCCAGCTCTTGTCCGAGGACGAGTACCTCAAGGCGCAGGAGGAGTTCGGTCCGGACTCTTTCACCGCCACCATCGGCGCGGAAGCGATCCGCGAGATGCTCAAGGCGCTCGATCTCGACAAGATGCAGGCCGAGTTGCGCACCGCGTTGGGCGAGACCGACAGCGACATCAAGAAGAAGAAATTCGCCAAGCGGCTCAAGCTGATCGAGGCCTTCATCGCCTCCGGCAACAAGCCGGAATGGATGATCCTCACGGTGGTGCCGGTGATCCCGCCCGACCTGCGGCCGCTGGTGCCGCTCGACGGCGGCCGCTTCGCCACCTCCGACCTGAACGATCTCTACCGCCGCGTCATCAACCGCAACAACCGTCGAGCTGCGCGCGCCGGACATCATCATCCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTCGATGCGCTGTTCGACAACGGCCGCCGCGGCCGCGTCATCACCGGCGCCAACAAGCGGCCGCTCAAGTCGCTCGCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTATTCCGGCCGCTCGGTGATCGTGGTCGGTCCCGAGCTCAAGCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTATTCGCGGCTCGACGCCAAGGGCCTGTCCACCACGGTGAAGCAGGCCAAGAAGCTGGTCGAGAAGGAGAAGCCGGAGGTTTGGGACATCCTCGACGAGGTGATCCGCGAGCATCCGGTGCTCTTGAACCGCGCGCCCACCCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGCGCCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCGCTGTCGCTGGAAGCGCAGCTGGAAGCGCGCGTGCTGATGATGTCGCCAACAACATCCTGCATCCGGCGAACGGCCAGCCGATCATCGTGCCGTCGCAGGACATCGTGCTCGGCCTCTACTACCTCTCGCTGATGCGCGAGGGCATGCCCGGCGAAAACAAGGCCTTCGGCGACATGGCATCGATCGAGCATGCGCTGGCCGAAAAGGTCATCAGCCTGCACAGCAAGATTCGCTATCGCTGGGAAGGCGTCGACGAGAAGGGCAAGTCGTACAAGAAGTGGTACGAGACCACGCCCGGCCGCGTCATCCTCGGCAACGTGCTGCCGCGCGACGTGAAAGCGCCGTTCGACATCGTCAATAAGCTGATGACCAAGCGCGAAATCTCCGGGATGATCGATCAGGTCTACCGCCACTGCGGCCAGAAGGAGACGGTCATCTTCTGCGACCGCATCATGGCGCTCGGCTTCTATCACGCCTTCAAGGCCGGCATCTCGTTCGGCAAGGACGACATGGTGGTGCCGGAGTCGAAGTGGAACATCGTCGAGACCACGCGCCAGCTCGCCAAGGAATTCGAGCAGCAATACAACGACGGCCTGATCACGCAGGGCGAGAAATACAACAAGGTGGTCGACGCCTGGTCGAAGTCCACCGACAAGATCGCCGAAGAAATGATGCGTGAAATCTCGTCCACCAAGAAGGACGCGCAGGGGCGCGACCAGCAGGTCAACTCGATCTACATGATGGCGCATTCCGGCGCGCGCGGCTCGCCGGCGCAAATGCGCCAGCTCGCCGGCATGCGCGGGCTGATGGCGAAACCGTCGGGCGAAATCATCGAGAGCCCGATCATCTCGAACTTCAAGGAAGGCCTGTCGGTGCTCGAGTACTTCAACTCGACGCACGGCGCCCGCAAGGGCCTCGCCGACACCGCCTTGAAGACCGCGAACTCGGGCTACCTGACGCGGCGTCTGGTCGACGTGGCGCAGGACTGCATCATCACGATCCCCGACTGCGGCACCAAGTCCGGCATCAAGGTGCGCGCCATCATCGACGCGGGCACCGTGGTCGCGCCGCTGGCGATCCGCATCCTCGGCCGCACCACGGCGGAGGACGTCAAGGATCCATCCAGCAACAAGGTCGTGGTCAAGCGCGGCACCCTGCTGACGGAGCCGGAAGTCGAGGCGATCACCACGGCCGGCGTGCAGGAGATGAAAATCCGCTCGGTGCTCACCTGCGAGTCGAAGAACGGCGTCTGCGGCGCCTGCTACGGGCGCGATCTCGCGCGCGGCACACCGGTCAACATGGGCGAGGCGGTGGGCGTCATCGCCGCCCAGTCGATCGGCGAGCCGGGCACCCAGCTCACCATGCGCACCTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCGCCAAGAACACGGACGGCGACGTGGTGGCGATGGTGCGCAACATGGTGGTGGCGGTGATCGACCCCGACGGCACCGAGCGCGCGCATCACCGCATTCCGTATGGCGCGCGCATGCGCGTCGAGGACGGCGACAAGGTCAAGCGTGGCCAGCGTATCGCCGAGTGGGATCCGTATACCCGGCCGATCCTCACCGAGGTCGAGGGCTCGATCGCCTTCGAAGACCTGGTCGACGGCCTGTCGATGTCGGAAGCGGTCGACGAGTCGACCGGCATCGCCAAGCGCGTGGTGATCGACTGGCGCACGGGTTCATCCCGTAACCAGGCTGACCTGCGTCCGGCGATGATCATCAAGGGCAAGGACGGCAAGATCCTCAAGCTCGCGCGCGGCGGCGAGGCCCGTTACCAGCTAGCGGTCGACGCGGTTATCTCGGTCGATCCGGGCGGCAAGGTGAAGGCGGGCGACGTGATCGCGCGTATCCCGACCGAAAGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGGGTGGCGGAACTGTTCGAGGCGCGCAAACCGAAGGACGCGGCGATCATCGCCGAGATCGGCGGCACGGTGCGGTTCGGCAAGGACTACAAGAACAAGCGCCGCATCACCATCGAGCCGACCGGCAAGGGCGAGGAGCCGAAGGAGTATCTGATCCCGAAGGGCAAGCACATCCATCTGCAGGATGGCGACGTCATCGAGAAGGGCGACTATATCGTCGAGGGCAATCCCGCCCCGCACGACATCCTCGCCATCAAGGGCGTCGAGGAGCTGGCCGCCTATCTGGTGAACGAAATCCAGGAGGTCTACCGGCTGCAAGGCGTCAACATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCAGAAGGTCGAGATCGACGACGCCGGCGATACCGAGCTGTTGCAGAGCGAGCAGATCGATCGGAGCGAGATGGACGAAATCAACGTCCGCATGGAAGCCGAAGGCAAGAAGCCGGCCAGCGGACATCCCGTGCTGCTCGGCATCACCAAGGCCAGCCTGCAGACCCGCTCCTTCATCTCGGCGGCCTCGTTCCAGGAGACCACGCGTGTGCTCACCGAGGCCGCGGTCAACGGCAAGGCGGACACCCTCGACGGCCTCAAGGAAAACGTCATCGTCGGCCGCCTGATCCCGGCCGGCACCGGCGCGATGATGAACACGTTGCGCGAGGTCGCGGTCAAACGCGACGCCCTCATCCTCGAGGAGCGCGAGAAGGATGCGGCCAAGGCCGCGTCCGCGGCCGAAGCGGCGGCGGCACCGGCCCTGCCGGCGGCCGAATAG
PROTEIN sequence
Length: 1391
MNQEIMNLFSPQVPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTPLKDRQLLSEDEYLKAQEEFGPDSFTATIGAEAIREMLKALDLDKMQAELRTALGETDSDIKKKKFAKRLKLIEAFIASGNKPEWMILTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRRAARAGHHHPQRKAHAAGSGRCAVRQRPPRPRHHRRQQAAAQVARRHAQGQAGPLPPEPARQARRLFRPLGDRGRSRAQAAPVRPAEEDGARAVQAVHLFAARRQGPVHHGEAGQEAGREGEAGGLGHPRRGDPRASGALEPRAHPAPPRHPGVRAGADRGQGDPAASAGLRRVQRRLRRRPDGRARSAVAGSAAGSARADDVANNILHPANGQPIIVPSQDIVLGLYYLSLMREGMPGENKAFGDMASIEHALAEKVISLHSKIRYRWEGVDEKGKSYKKWYETTPGRVILGNVLPRDVKAPFDIVNKLMTKREISGMIDQVYRHCGQKETVIFCDRIMALGFYHAFKAGISFGKDDMVVPESKWNIVETTRQLAKEFEQQYNDGLITQGEKYNKVVDAWSKSTDKIAEEMMREISSTKKDAQGRDQQVNSIYMMAHSGARGSPAQMRQLAGMRGLMAKPSGEIIESPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIITIPDCGTKSGIKVRAIIDAGTVVAPLAIRILGRTTAEDVKDPSSNKVVVKRGTLLTEPEVEAITTAGVQEMKIRSVLTCESKNGVCGACYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFXXXXXXXXXXXXXXXXXXXXXIAKNTDGDVVAMVRNMVVAVIDPDGTERAHHRIPYGARMRVEDGDKVKRGQRIAEWDPYTRPILTEVEGSIAFEDLVDGLSMSEAVDESTGIAKRVVIDWRTGSSRNQADLRPAMIIKGKDGKILKLARGGEARYQLAVDAVISVDPGGKVKAGDVIARIPTESAKTRDITGGLPRVAELFEARKPKDAAIIAEIGGTVRFGKDYKNKRRITIEPTGKGEEPKEYLIPKGKHIHLQDGDVIEKGDYIVEGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKVEIDDAGDTELLQSEQIDRSEMDEINVRMEAEGKKPASGHPVLLGITKASLQTRSFISAASFQETTRVLTEAAVNGKADTLDGLKENVIVGRLIPAGTGAMMNTLREVAVKRDALILEEREKDAAKAASAAEAAAAPALPAAE*