ggKbase home page

RBGRP_159_21

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 23479..24225

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 251.0
  • Bit_score: 381
  • Evalue 7.10e-103
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 251.0
  • Bit_score: 376
  • Evalue 4.60e-102
50S ribosomal protein L3 n=11 Tax=Bradyrhizobiaceae RepID=RL3_NITWN similarity UNIREF
DB: UNIREF90
  • Identity: 75.0
  • Coverage: 0.0
  • Bit_score: 375
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCGTTCGGGAGTGATCGCGCAAAAGGTCGGAATGACCCGGGTGTTCTCCGAGAGCGGAGAGCACGTGCCGGTGACGGTGCTGCAGCTTGCGCAGTGCCAGGTCGTCGCGCACCGCACCAAAGACAAGAACGGCTATGTCGCGCTNNNNNNNNNNNNNNNNCCCAACAATATGAACAAGGCGGATCGCGGCTATTTCGGCAAAGCCAAGGTCGAGCCGCGCCGTAAGCTCGCCGAATTCCGCGTCAGCGAGGATGCGCTGATCCCGGTCGGCGCCGAGATCACCGCCGATCATTTTGTCGAAGGCCAGTTCGTCGATGTCTGCGGCATCTCGATCGGCAAGGGTTTTGCCGGCGGCATGAAGCGCTGGAACTTCGCCGGCCTGCGCGCCTCGCACGGCGTGTCGATCTCGCACCGCTCGATCGGTTCGACCGGCGGCCGTCAGGATCCCGGCAAGACCTTCAAGAACAAGAAGATGCCCGGCCACATGGGCGTCGATCGCATCACCACGCTCAATCTCAAGGTGGTGAAGACCGACGTCGAACGCGGCCTGCTGCTGATCGAAGGCGCGGTGCCGGGCGCCAAGGGCGGCTGGATTACGGTACGCGACGCGGTGAAGAAGAAGCTGCCGAAGGAAGCGCCGAAGCCCGGCAAGTTCCGCGTCAGCGAGACCGCCGCCGAGGCCAAGTCCGAGGTTAAGCCCGCCGAGGCGCCAGCCGCCGCCCCCGCCGCGAAGGAGGGCGCGTAA
PROTEIN sequence
Length: 249
MRSGVIAQKVGMTRVFSESGEHVPVTVLQLAQCQVVAHRTKDKNGYVAXXXXXXPNNMNKADRGYFGKAKVEPRRKLAEFRVSEDALIPVGAEITADHFVEGQFVDVCGISIGKGFAGGMKRWNFAGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLKVVKTDVERGLLLIEGAVPGAKGGWITVRDAVKKKLPKEAPKPGKFRVSETAAEAKSEVKPAEAPAAAPAAKEGA*