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RBGRP_161_25

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 11289..11681

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 84.0
  • Bit_score: 166
  • Evalue 1.90e-38
Ribosomal protein S4 n=1 Tax=Cycloclasticus sp. P1 RepID=K0C842_9GAMM similarity UNIREF
DB: UNIREF90
  • Identity: 79.0
  • Coverage: 0.0
  • Bit_score: 146
  • Evalue 6.00e+00
Ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 83.0
  • Bit_score: 144
  • Evalue 1.50e-32

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Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
GTGGCGCGTTATACCGATTCCAAGTGTCGTCAATGCCGTCGTGAAGGCGGCAAGCTGTTCCTGAAGGGCGAGAAGTGCTTCACCGAGAAGTGTCCGGTGGACAAGCGCGCCTATCCTCCCGGCCAGCACGGCCAGCAGAAGAGCCGCCTGTCCGATTACGGCAAGCAGCTGCGCGAGAAGCAGAAGCTGCGCCGCATCTATGGCGTGCTCGAGCGCCAGTTCAAGAATTACTACCAGGAAGCCGCGCGCCACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCATTTCGCGCTCCGAGTCGAGGCAGCTCGTGCGTCACAACGCCGTGCTCGTCAACGGCAAGCGCGTGA
PROTEIN sequence
Length: 131
VARYTDSKCRQCRREGGKLFLKGEKCFTEKCPVDKRAYPPGQHGQQKSRLSDYGKQLREKQKLRRIYGVLERQFKNYYQEAARHXXXXXXXXXXXXXXXXXXXXXXXXAFRAPSRGSSCVTTPCSSTASA*