ggKbase home page

RBGRP_161

Alias: scaffold_105097

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_161_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1..369
DNA (369bp) protein (123aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 n=3 Tax=Burkholderia RepID=G8M947_9BURK
RBGRP_161_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


391..996
DNA (606bp) protein (202aa)
rplD; 50S ribosomal protein L4 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 n=1 Tax=Marinobacter sp. ELB17 RepID=A3JEQ2_9ALTE
RBGRP_161_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


993..1361
DNA (369bp) protein (123aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 n=1 Tax=Methylobacillus flagellatus KT RepID=RL23_METFK
RBGRP_161_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1374..2195
DNA (822bp) protein (274aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L2
50S ribosomal protein L2 n=1 Tax=Dechlorosoma suillum PS RepID=G8QNX5_AZOSU
RBGRP_161_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2211..2501
DNA (291bp) protein (97aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ribosomal protein S19 n=2 Tax=Nitrosomonas RepID=F9ZGV2_9PROT
30S ribosomal protein S19
RBGRP_161_6

Not on your lists


2855..3535
DNA (681bp) protein (227aa)
Ribosomal protein S3, bacterial {ECO:0000313|EMBL:EQD45149.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=3 Tax=Methylophilaceae RepID=RS3_METFK
RBGRP_161_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3729..4145
DNA (417bp) protein (139aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L16
50S ribosomal protein L16 n=4 Tax=Marinomonas RepID=RL16_MARMS
RBGRP_161_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4153..4347
DNA (195bp) protein (65aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L29
50S ribosomal protein L29 n=7 Tax=Halomonadaceae RepID=RL29_CHRSD
RBGRP_161_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4352..4618
DNA (267bp) protein (89aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
30S ribosomal protein S17
30S ribosomal protein S17 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=RS17_ALHEH
RBGRP_161_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4707..5075
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L14 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCP5_9GAMM
rplN; 50S ribosomal protein L14
RBGRP_161_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5088..5420
DNA (333bp) protein (111aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplX; 50S ribosomal subunit protein L24
50S ribosomal protein L24 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCP4_9GAMM
RBGRP_161_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5408..5947
DNA (540bp) protein (180aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L5
50S ribosomal protein L5 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5U7_9GAMM
RBGRP_161_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5958..6224
DNA (267bp) protein (89aa)
30S ribosomal protein S14 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
30S ribosomal protein S14
30S ribosomal protein S14 n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6V8U4_9PROT
RBGRP_161_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6304..6696
DNA (393bp) protein (131aa)
rpsH; 30S ribosomal protein S8 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 n=1 Tax=Azoarcus sp. BH72 RepID=RS8_AZOSB
RBGRP_161_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6812..7237
DNA (426bp) protein (142aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Methylophaga sp. JAM1 RepID=I1XL42_METNJ
RBGRP_161_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7265..7621
DNA (357bp) protein (119aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L18
50S ribosomal protein L18 n=3 Tax=Methylophilaceae RepID=RL18_METFK
RBGRP_161_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7632..8141
DNA (510bp) protein (170aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Thioalkalivibrio sulfidophilus HL-EbGr7 RepID=B8GV41_THISH
RBGRP_161_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8153..8338
DNA (186bp) protein (62aa)
ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 n=1 Tax=Thauera sp. MZ1T RepID=C4KC34_THASP
RBGRP_161_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8341..8796
DNA (456bp) protein (152aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RL15_DICNV
RBGRP_161_20
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8971..9219)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI74126.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
RBGRP_161_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9379..10209
DNA (831bp) protein (277aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Protein translocase subunit SecY (Fragment) n=1 Tax=uncultured bacterium RepID=K2F0V9_9BACT
secY; preprotein translocase membrane subunit
RBGRP_161_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10242..10355
DNA (114bp) protein (38aa)
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Gamma2_65_34_curated
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 n=24 Tax=Francisella RepID=RL36_FRAT1
RBGRP_161_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10445..10825
DNA (381bp) protein (127aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
30S ribosomal protein S13 n=1 Tax=uncultured beta proteobacterium RepID=H5SGX8_9PROT
rpsM; 30S ribosomal protein S13
RBGRP_161_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10845..11264
DNA (420bp) protein (140aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=RS11_THIDA
RBGRP_161_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11289..11681
DNA (393bp) protein (131aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ribosomal protein S4 n=1 Tax=Cycloclasticus sp. P1 RepID=K0C842_9GAMM
Ribosomal protein S4
RBGRP_161_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11642..11911
DNA (270bp) protein (90aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=D5CP90_SIDLE
RBGRP_161_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11941..12954
DNA (1014bp) protein (338aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpoA; DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGL5_9GAMM
RBGRP_161_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12975..13475
DNA (501bp) protein (167aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2IBN9_9GAMM
RBGRP_161_29
unknown

Not on your lists

comp(13328..13930)
DNA (603bp) protein (201aa)

This feature has no annotations

RBGRP_161_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13980..14369
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IUL6_RHOCS
Displaying items 1-30 of 31 in total

View Taxonomy