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S15_scaffold_116_curated_3

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(4582..5364)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00031707EB similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 253.0
  • Bit_score: 473
  • Evalue 7.80e-131
  • rbh
Periplasmic amino acid-binding protein-like protein {ECO:0000313|EMBL:BAQ80708.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 260.0
  • Bit_score: 506
  • Evalue 1.50e-140
periplasmic amino acid-binding protein-like protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 255.0
  • Bit_score: 479
  • Evalue 5.20e-133

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GTGGGCCTGTGCCTGAGCCTGTGCTTGATCCTGCTGGCCGGCCCGACGTTCGCTGACCCCCGGCCCATGCTGCGTTATTGCGACTACCCGGTGTACCCGCCGATCTCCTGGAGCGACGGCCAGCAGGTGCGCGGGCTGGCGCCGACCCTGGTGCGTCAGGTGCTGGGGGACCTGGGTTATCAGGTGCAGGTGGTGGTGCTGGGCAACTGGAAGCGCTGCCTGCTGGACGCCGCCGCGGGCCGGGTGGATGTGGTGCTGGCCTACAGCACCAGCCAGCGCCAGCAGGACCTGCTGTTTTCCCAGGTGCCGGTGCTGCGCGAAGAAGTCGCGCTGTTCGTCAACCGCCGCCATCTGCCGCGTTTTACGCACTTGCAGGGCTTGCGGGCCTATCGCGGCGGCCTGCTGTTCGGCGAGAGCTACGGCCAGGATTTCGACCGCGAAGTGGTGCAGCACGGCAACATCGAATGGGTCTCCAGCAGTCAGCAGAACTTCGGCAAGCTGATTCGCCAGCGCATCGATTTCATCCCCCATGAACGCCGCACCGGGCAGCTGTTTATCGAGCAACTGCCGGGGGCCCAAGACATCATCGCCTTGCCCCAGGCGGTGAGCGTCGACTACCTGCGCCTGGCGGTGTCGCGCCACTCGCCCCTGGCGCCGCGCATGGCCGAGATCGACGCGCGGTTGCAGCAGCAGGTGGACAGCGGCGCGGTGCAGCGCTGGCTGGCGCAAAGCCAGGACGACTACCGCGCCATGCTCAAGGCGCAACGGGGGACGGCGCCATGA
PROTEIN sequence
Length: 261
VGLCLSLCLILLAGPTFADPRPMLRYCDYPVYPPISWSDGQQVRGLAPTLVRQVLGDLGYQVQVVVLGNWKRCLLDAAAGRVDVVLAYSTSQRQQDLLFSQVPVLREEVALFVNRRHLPRFTHLQGLRAYRGGLLFGESYGQDFDREVVQHGNIEWVSSSQQNFGKLIRQRIDFIPHERRTGQLFIEQLPGAQDIIALPQAVSVDYLRLAVSRHSPLAPRMAEIDARLQQQVDSGAVQRWLAQSQDDYRAMLKAQRGTAP*