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NECEvent2014_2_2_scaffold_4

Alias: 172_002_scaffold_4

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Displaying items 1-30 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_2_scaffold_4_1
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(311..1615)
DNA (1305bp) protein (435aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW26_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGC81985.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii A
hypothetical protein
NECEvent2014_2_2_scaffold_4_2
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1710..2477)
DNA (768bp) protein (256aa)
Putative RNA polymerase sigma-F factor n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW27_9FIRM rbh
Putative RNA polymerase sigma-F factor {ECO:0000313|EMBL:EGC81925.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prev
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
NECEvent2014_2_2_scaffold_4_3
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2477..2812)
DNA (336bp) protein (112aa)
Serine-protein kinase RsbW family protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW28_9FIRM
Serine-protein kinase RsbW family protein {ECO:0000313|EMBL:EGC81978.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus p
putative anti-sigma regulatory factor
NECEvent2014_2_2_scaffold_4_4
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2814..3119)
DNA (306bp) protein (102aa)
Anti-sigma factor antagonist n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW29_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS
anti-sigma-factor antagonist
NECEvent2014_2_2_scaffold_4_5
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3112..5556)
DNA (2445bp) protein (815aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaeroc
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW30_9FIRM rbh
NECEvent2014_2_2_scaffold_4_6
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5565..7466)
DNA (1902bp) protein (634aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=879305 species="Bacteria; Fi
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW31_9FIRM rbh
NECEvent2014_2_2_scaffold_4_7
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7468..8547)
DNA (1080bp) protein (360aa)
DNA replication and repair protein RecF n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW32_9FIRM rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaer
DNA replication and repair protein RecF
NECEvent2014_2_2_scaffold_4_8
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8665..9873)
DNA (1209bp) protein (403aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=879305 species="Bacter
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW34_9FIRM rbh
NECEvent2014_2_2_scaffold_4_9
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10099..11478)
DNA (1380bp) protein (460aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW35_9FIRM rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaer
chromosomal replication initiator protein DnaA
NECEvent2014_2_2_scaffold_4_10
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12176..12310
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Anaerococcus RepID=C7REZ4_ANAPD
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" sou
NECEvent2014_2_2_scaffold_4_11
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12403..12753
DNA (351bp) protein (117aa)
Ribonuclease P protein component n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW36_9FIRM
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
ribonuclease P protein component
NECEvent2014_2_2_scaffold_4_12
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12989..13723
DNA (735bp) protein (245aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW38_9FIRM rbh
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EGC81974.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcu
60 kDa inner membrane insertion protein
NECEvent2014_2_2_scaffold_4_13
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13704..14588
DNA (885bp) protein (295aa)
R3H domain protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CJL5_9FIRM rbh
R3H domain protein {ECO:0000313|EMBL:EEI82162.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
single-stranded nucleic acid binding R3H domain-containing protein
NECEvent2014_2_2_scaffold_4_14
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14666..16396)
DNA (1731bp) protein (577aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW41_9FIRM rbh
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EGC81969.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevoti
Na/Pi-cotransporter II-like protein
NECEvent2014_2_2_scaffold_4_15
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16600..17967
DNA (1368bp) protein (456aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae;
tRNA modification GTPase MnmE n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW42_9FIRM rbh
tRNA modification GTPase TrmE
NECEvent2014_2_2_scaffold_4_16
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17954..19855
DNA (1902bp) protein (634aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW43_9FIRM rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=879305 species="Bacter
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
NECEvent2014_2_2_scaffold_4_17
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19842..20480
DNA (639bp) protein (213aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW44_9FIRM rbh
methyltransferase GidB
NECEvent2014_2_2_scaffold_4_18
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20509..21288
DNA (780bp) protein (260aa)
CAAX amino terminal protease family protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW45_9FIRM rbh
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EGC82013.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus
abortive infection protein
NECEvent2014_2_2_scaffold_4_19
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21362..22582
DNA (1221bp) protein (407aa)
Putative competence-damage inducible protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CJM0_9FIRM rbh
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaeroc
competence/damage-inducible protein CinA
NECEvent2014_2_2_scaffold_4_20
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22560..23447
DNA (888bp) protein (296aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW48_9FIRM rbh
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EGC81935.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcu
Cobyrinic acid ac-diamide synthase
NECEvent2014_2_2_scaffold_4_21
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23454..24359
DNA (906bp) protein (302aa)
Putative stage 0 sporulation protein J n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW49_9FIRM rbh
Putative stage 0 sporulation protein J {ECO:0000313|EMBL:EGC81924.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prev
parB-like partition protein
NECEvent2014_2_2_scaffold_4_22
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24313..24864
DNA (552bp) protein (184aa)
Conserved domain protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW50_9FIRM rbh
Conserved domain protein {ECO:0000313|EMBL:EGC82001.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V
hypothetical protein
NECEvent2014_2_2_scaffold_4_23
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24846..25319
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW51_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EGC82005.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii A
hypothetical protein
NECEvent2014_2_2_scaffold_4_24
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25398..26384
DNA (987bp) protein (329aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EGC81936.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EGC81936.1};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococ
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW52_9FIRM rbh
NECEvent2014_2_2_scaffold_4_25
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26634..27773
DNA (1140bp) protein (380aa)
Putative membrane protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW54_9FIRM rbh
Putative membrane protein {ECO:0000313|EMBL:EGC81953.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-
hypothetical protein
NECEvent2014_2_2_scaffold_4_26
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27936..28253
DNA (318bp) protein (106aa)
Nitrogen regulatory protein P-II (GlnB, GlnK) n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7REX7_ANAPD
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II (GlnB, GlnK) {ECO:0000313|EMBL:ACV29740.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococc
NECEvent2014_2_2_scaffold_4_27
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28262..28570
DNA (309bp) protein (103aa)
Thioredoxin n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW56_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
thioredoxin domain-containing protein
NECEvent2014_2_2_scaffold_4_28
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28570..29436
DNA (867bp) protein (289aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW57_9FIRM rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EGC81984.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcu
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_2_2_scaffold_4_29
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29694..30167
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW58_9FIRM rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGC81977.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prev
MarR family transcriptional regulator
NECEvent2014_2_2_scaffold_4_30
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30167..32122
DNA (1956bp) protein (652aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pepton
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW59_9FIRM rbh
Displaying items 1-30 of 186 in total

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