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NECEvent2014_2_3_scaffold_240

Alias: 172_003_scaffold_240

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_240_1
Veillonella sp. DORA_B_18_19_23, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..97
DNA (96bp) protein (32aa)
Elongation factor Tu n=6 Tax=Veillonella RepID=E1L691_9FIRM
translation elongation factor Tu
Elongation factor Tu 1 {ECO:0000313|EMBL:ETI93408.1}; Flags: Fragment;; TaxID=1403933 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella
NECEvent2014_2_3_scaffold_240_2
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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275..2512
DNA (2238bp) protein (746aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBN3_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFR60983.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 15
nitric oxide reductase large subunit-like protein
NECEvent2014_2_3_scaffold_240_3
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


2841..2990
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=13 Tax=Veillonella RepID=D1BP81_VEIPT
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
NECEvent2014_2_3_scaffold_240_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3032..3253
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNA9_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella disp
preprotein translocase subunit SecE
NECEvent2014_2_3_scaffold_240_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3266..3802
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB0_9FIRM rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Vei
NusG antitermination factor
NECEvent2014_2_3_scaffold_240_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3906..4331
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=12 Tax=Veillonella RepID=D1BP78_VEIPT
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_2_3_scaffold_240_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4408..5118
DNA (711bp) protein (237aa)
50S ribosomal protein L1 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB2_9FIRM rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC
50S ribosomal protein L1
NECEvent2014_2_3_scaffold_240_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5293..5799
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB3_9FIRM rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A
50S ribosomal protein L10
NECEvent2014_2_3_scaffold_240_9
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5870..6238
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Veillonella sp. ACP1 RepID=J4RP80_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM5
50S ribosomal protein L7/L12
NECEvent2014_2_3_scaffold_240_10
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6288..7904)
DNA (1617bp) protein (539aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EFR60666.1}; EC=2.4.1.109 {ECO:0000313|EMBL:EFR60666.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomona
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBM5_9FIRM rbh
glycosyl transferase family protein
NECEvent2014_2_3_scaffold_240_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8173..9588
DNA (1416bp) protein (472aa)
Aspartate ammonia-lyase n=2 Tax=Veillonella RepID=D6KQJ7_9FIRM rbh
Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EGL78350.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
fumarate lyase
NECEvent2014_2_3_scaffold_240_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9879..14072
DNA (4194bp) protein (1398aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB8_9FIRM rbh
DNA-directed RNA polymerase subunit beta
NECEvent2014_2_3_scaffold_240_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14102..18304
DNA (4203bp) protein (1401aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB9_9FIRM rbh
DNA-directed RNA polymerase subunit beta'
NECEvent2014_2_3_scaffold_240_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18758..19003
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP66378.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748
ribosomal protein L7Ae-like protein
NECEvent2014_2_3_scaffold_240_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


19080..19454
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=13 Tax=Veillonella RepID=D1BP68_VEIPT
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_2_3_scaffold_240_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


19507..19977
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=12 Tax=Veillonella RepID=D1BP67_VEIPT rbh
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-
NECEvent2014_2_3_scaffold_240_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19993..22068
DNA (2076bp) protein (692aa)
Elongation factor G n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FNC3_9FIRM rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veill
translation elongation factor G
NECEvent2014_2_3_scaffold_240_18
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22119..22214
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJC5_9BACE
tuf2; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales;
Displaying 18 items

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