Alias: 172_003_scaffold_87
| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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NECEvent2014_2_3_scaffold_87_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(354..896)
----------------- DNA (543bp) protein (181aa) |
Uncharacterized protein {ECO:0000313|EMBL:EGX73443.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
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NECEvent2014_2_3_scaffold_87_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1175..1846)
----------------- DNA (672bp) protein (224aa) |
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium difficile RepID=G6BU13_CLODI
rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC75402.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
Predicted transcription factor, homolog of eukaryotic MBF1
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NECEvent2014_2_3_scaffold_87_3
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2553..3404
----------------- DNA (852bp) protein (284aa) |
Replication initiation factor family protein n=1 Tax=Clostridium difficile Y231 RepID=T4EC69_CLODI
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGG87032.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Putative phage replication protein RstA
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NECEvent2014_2_3_scaffold_87_4
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
3404..3607
----------------- DNA (204bp) protein (68aa) |
Excisionase from transposon Tn916 n=19 Tax=Bacteria RepID=D4MW18_9FIRM
Excisionase from transposon Tn916.
Excisionase {ECO:0000313|EMBL:ERT24258.1}; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
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NECEvent2014_2_3_scaffold_87_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
3695..4888
----------------- DNA (1194bp) protein (398aa) |
Site-specific recombinase, phage integrase family n=3 Tax=Clostridiales RepID=A5KNK3_9FIRM
rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDK23941.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus
Site-specific recombinase XerD
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NECEvent2014_2_3_scaffold_87_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5127..6254
----------------- DNA (1128bp) protein (376aa) |
Diguanylate cyclase domain protein n=50 Tax=Clostridium difficile RepID=T2UW16_CLODI
rbh
putative signaling protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG74481.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr
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NECEvent2014_2_3_scaffold_87_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
6508..7170
----------------- DNA (663bp) protein (221aa) |
B3/4 domain protein n=147 Tax=Clostridium difficile RepID=T3GAR9_CLODC
rbh
putative tRNA-binding protein
B3/4 domain-containing protein {ECO:0000313|EMBL:CKG87928.1}; Putative tRNA-binding protein {ECO:0000313|EMBL:CEJ99602.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
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NECEvent2014_2_3_scaffold_87_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7541..8950
----------------- DNA (1410bp) protein (470aa) |
Uncharacterized protein n=114 Tax=Clostridium difficile RepID=Q184F4_CLOD6
rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL23311.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
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NECEvent2014_2_3_scaffold_87_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9065..9340
----------------- DNA (276bp) protein (92aa) |
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=T3GCB7_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE60220.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
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NECEvent2014_2_3_scaffold_87_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9970..10281
----------------- DNA (312bp) protein (104aa) |
Uncharacterized protein n=205 Tax=Clostridium difficile RepID=T3G977_CLODC
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EQG74555.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
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NECEvent2014_2_3_scaffold_87_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10283..12208
----------------- DNA (1926bp) protein (642aa) |
atpI; V-type sodium ATP synthase subunit I (EC:3.6.3.15)
V-type ATPase subunit I family protein n=66 Tax=Clostridium difficile RepID=T3GAW6_CLODC
rbh
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
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NECEvent2014_2_3_scaffold_87_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12211..12702
----------------- DNA (492bp) protein (164aa) |
V-type ATP synthase subunit K (EC:3.6.3.14)
V-type ATP synthase subunit K {ECO:0000313|EMBL:CCL31205.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCL31205.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
V-type sodium ATP synthase subunit K n=219 Tax=Clostridium difficile RepID=C9XPV9_CLODC
rbh
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NECEvent2014_2_3_scaffold_87_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12754..13317
----------------- DNA (564bp) protein (188aa) |
V-type ATP synthase subunit E n=202 Tax=Clostridium difficile RepID=VATE_CLOD6
rbh
V-type sodium ATP synthase subunit E
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
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NECEvent2014_2_3_scaffold_87_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13332..14309
----------------- DNA (978bp) protein (326aa) |
V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C {ECO:0000313|EMBL:CCL31203.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCL31203.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
ATP synthase (C/AC39) subunit n=189 Tax=Clostridium difficile RepID=C9XPV7_CLODC
rbh
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NECEvent2014_2_3_scaffold_87_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14302..14619
----------------- DNA (318bp) protein (106aa) |
V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F {ECO:0000313|EMBL:CCL31202.1}; EC=3.6.3.14 {ECO:0000313|EMBL:CCL31202.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae;
V-type sodium ATP synthase subunit G n=209 Tax=Clostridium difficile RepID=C9XPV6_CLODC
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NECEvent2014_2_3_scaffold_87_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
14736..16514
----------------- DNA (1779bp) protein (593aa) |
atpA; V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1151334 species="Bacteria
V-type ATP synthase alpha chain n=206 Tax=Clostridium difficile RepID=VATA_CLOD6
rbh
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NECEvent2014_2_3_scaffold_87_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16511..17884
----------------- DNA (1374bp) protein (458aa) |
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=220 Tax=Clostridium difficile RepID=VATB_CLOD6
rbh
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
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NECEvent2014_2_3_scaffold_87_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17890..18558
----------------- DNA (669bp) protein (223aa) |
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=162 Tax=Clostridium difficile RepID=VATD_CLOD6
rbh
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrep
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NECEvent2014_2_3_scaffold_87_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
18835..19884
----------------- DNA (1050bp) protein (350aa) |
2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding family protein n=6 Tax=Clostridium difficile RepID=T3G829_CLODC
rbh
ABC-type transport system, iron-familyextracellular solute-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CKG88248.1}; ABC-type transport system, iron-familyextracellular solute-binding protein {ECO:0000313|EMBL:CEJ99590.1}; TaxID=1496 species="B
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NECEvent2014_2_3_scaffold_87_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
19980..20126
----------------- DNA (147bp) protein (49aa) |
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3G965_CLODC
ABC-type transport system,ATP-binding protein
ABC-type transport system,ATP-binding protein {ECO:0000313|EMBL:CEJ99519.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
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NECEvent2014_2_3_scaffold_87_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20119..21477)
----------------- DNA (1359bp) protein (453aa) |
Recombinase family protein n=10 Tax=root RepID=T3GAV5_CLODC
rbh
putative phage site-specific integrase
Phage site-specific recombinase {ECO:0000313|EMBL:CKG88290.1}; Putative phage site-specific integrase {ECO:0000313|EMBL:CEJ99589.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales
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NECEvent2014_2_3_scaffold_87_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21542..22015)
----------------- DNA (474bp) protein (158aa) |
Uncharacterized protein n=10 Tax=root RepID=T3GD89_CLODC
rbh
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CAJ69843.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffici
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NECEvent2014_2_3_scaffold_87_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22033..22572)
----------------- DNA (540bp) protein (180aa) |
Helix-turn-helix family protein n=1 Tax=Clostridium difficile Y266 RepID=T4FA44_CLODI
rbh
Transcriptional regulator, HTH-type
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:CKG88332.1}; Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CEJ99587.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostrid
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NECEvent2014_2_3_scaffold_87_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22642..22863
----------------- DNA (222bp) protein (74aa) |
Helix-turn-helix family protein n=10 Tax=root RepID=T3G825_CLODC
Transcriptional regulator, Phage-type
Transcriptional regulator, Phage-type {ECO:0000313|EMBL:CAJ69841.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos
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NECEvent2014_2_3_scaffold_87_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
22911..23705
----------------- DNA (795bp) protein (265aa) |
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3G960_CLODC
rbh
hypothetical protein
Phage anti-repressor {ECO:0000313|EMBL:CKG88371.1}; Putative phage protein {ECO:0000313|EMBL:CEJ99585.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
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NECEvent2014_2_3_scaffold_87_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23771..23959
----------------- DNA (189bp) protein (63aa) |
Uncharacterized protein n=10 Tax=root RepID=T3GAV0_CLODC
Hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG88407.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ99584.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
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NECEvent2014_2_3_scaffold_87_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
23934..24161
----------------- DNA (228bp) protein (76aa) |
Putative phage protein n=4 Tax=Clostridium difficile RepID=T3IK57_CLODI
Putative phage protein {ECO:0000313|EMBL:CCL00291.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
putative phage protein
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NECEvent2014_2_3_scaffold_87_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24261..24578
----------------- DNA (318bp) protein (106aa) |
Uncharacterized protein n=9 Tax=root RepID=T3GCE7_CLODC
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CAJ69837.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffici
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NECEvent2014_2_3_scaffold_87_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24664..25173
----------------- DNA (510bp) protein (170aa) |
Siphovirus Gp157 family protein n=4 Tax=Clostridium difficile RepID=T3G821_CLODC
rbh
bacteriophage resistance protein
Putative bacteriophage resistance protein {ECO:0000313|EMBL:CEJ99581.1}; Siphovirus Gp157 {ECO:0000313|EMBL:CKG88462.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrep
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NECEvent2014_2_3_scaffold_87_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
25183..25773
----------------- DNA (591bp) protein (197aa) |
ERF superfamily protein n=20 Tax=Clostridium difficile RepID=T3G954_CLODC
rbh
putative phage essential recombination functionprotein
Putative phage essential recombination function protein {ECO:0000313|EMBL:CAJ69835.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
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