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NECEvent2014_2_3_scaffold_357

Alias: 172_003_scaffold_357

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_357_1
unknown

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_357_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(200..1240)
DNA (1041bp) protein (347aa)
PfoR protein n=194 Tax=Clostridium difficile RepID=D5Q222_CLODI rbh
putative membrane protein
Phosphotransferase system, EIIC family protein {ECO:0000313|EMBL:EQE60637.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=
NECEvent2014_2_3_scaffold_357_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1621..2256
DNA (636bp) protein (212aa)
HlyD secretion family protein n=91 Tax=Clostridium difficile RepID=T3GGR5_CLODC rbh
HlyD secretion family protein {ECO:0000313|EMBL:EQE60553.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
conserved hypothetical protein
NECEvent2014_2_3_scaffold_357_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2266..2970
DNA (705bp) protein (235aa)
Alanine racemase, N-terminal domain protein n=183 Tax=Clostridium difficile RepID=C9XMY9_CLODC rbh
alanine racemase
Putative pyridoxal 5'-phosphate-dependent enzyme {ECO:0000313|EMBL:CCL22980.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_357_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3010..3468
DNA (459bp) protein (153aa)
Cell division protein SepF n=203 Tax=Clostridium difficile RepID=SEPF_CLOD6 rbh
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridiu
NECEvent2014_2_3_scaffold_357_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3487..3744
DNA (258bp) protein (86aa)
YGGT family protein n=203 Tax=Clostridium difficile RepID=T3GEX4_CLODC
uncharacterised protein
YGGT family protein {ECO:0000313|EMBL:EQG76025.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_357_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3754..4539
DNA (786bp) protein (262aa)
S4 domain protein n=143 Tax=Clostridium difficile RepID=G6BZU0_CLODI rbh
RNA-binding cell division protein
Putative RNA-binding cell division protein {ECO:0000313|EMBL:CCL22977.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_357_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4574..5101
DNA (528bp) protein (176aa)
Cell-division initiation protein n=214 Tax=Clostridium difficile RepID=C9XMY5_CLODC rbh
cell-division initiation protein
Cell-division initiation protein {ECO:0000313|EMBL:CBE05878.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_3_scaffold_357_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5601..8708
DNA (3108bp) protein (1036aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=56 Tax=Clostridium difficile RepID=T3GC86_CLODC rbh
NECEvent2014_2_3_scaffold_357_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9004..9876
DNA (873bp) protein (291aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=T3GEY4_CLODC rbh
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ32762.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_357_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9927..10262
DNA (336bp) protein (112aa)
Uncharacterized protein n=196 Tax=Clostridium difficile RepID=C9XMY1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ32761.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_2_3_scaffold_357_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10425..10997)
DNA (573bp) protein (191aa)
Bacterial regulatory s, tetR family protein n=185 Tax=Clostridium difficile RepID=C9XMY0_CLODC rbh
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCL22972.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
NECEvent2014_2_3_scaffold_357_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11181..12023
DNA (843bp) protein (281aa)
EDD, DegV family domain protein n=121 Tax=Clostridium difficile RepID=C9XMX9_CLODC rbh
hypothetical protein
Uncharacterised protein, DegV family {ECO:0000313|EMBL:CAJ69500.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
NECEvent2014_2_3_scaffold_357_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12126..13202)
DNA (1077bp) protein (359aa)
Metallopeptidase M24 family protein n=4 Tax=Clostridium difficile RepID=T3GD97_CLODC rbh
peptidase
Metallopeptidase M24 family protein {ECO:0000313|EMBL:EQE60550.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
Displaying 14 items

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