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NECEvent2014_2_3_scaffold_100_10

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(11568..12404)

Top 3 Functional Annotations

Value Algorithm Source
Binding--dependent transport system inner membrane component family protein n=190 Tax=Clostridium difficile RepID=C9XMI1_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 278.0
  • Bit_score: 550
  • Evalue 1.20e-153
  • rbh
spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 278.0
  • Bit_score: 550
  • Evalue 3.40e-154
ABC-type transport system,spermidine/putrescine permease {ECO:0000313|EMBL:CCL29045.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 278.0
  • Bit_score: 550
  • Evalue 1.70e-153

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 837
ATGAAAAGAAAATCTTTTTTAGCATATCCATATGTAGTTTGGAGTGCGATATTTGTAATAATTCCTTTAATATTAGTAGTATTTTTTAGTTTTACAAAAGAATCAGGTGGAGGTTATGCCTTTACACTTGAGAATTATAAAGAAGTAATTGACCCTATATATATGAAAGTTTTTGGGCGTTCTATTCTTTTAGCAGGAGGAGCTACATTAATATGCCTTATAGTTGGTTATCCAGTGGCATATATAATTTCAAAGGCTCGTGTAAGTAGAAGAGGTTCATTAATATTATTGTTTATTCTTCCTATGTGGATGAACTTTCTTTTAAGAACATATGCATGGGTTGCTATATTAGGAAAAAATGGACTTTTAAATACATTTTTAGGTTGGTTTGGAATACAACCATTAGCAATTTTGTATACTAATTTTGCTATACTTTTAGGTATGGTGTATAACTTTTTACCATTTATGGTTCTTCCAATATATACAGCACTATCAAAGATGGATAATGATTTGATAAACGCTGCTCATGACTTGGGTGCAAATAATATGACAGTTTTTAGAAAAATTATATTTCCTTTGAGTTTGCCAGGTGTAATGTCTGGAATAACTATGGTATTTATGCCAGCAGTCACTACTTTTGCAATATCAAGACTGTTAGGTGGAGGTAAAATAATGCTGGTTGGAGATTTGATTGAACAACAGTTTACAGTTGTTGGAGATTGGAACTTTGGTTCAGCTATATCGATATTTATGATGATAGTAATATTAATATCTATGTCTATAATGTCAAAATTTGGAGATGAATCTGACAAAGAAGGCGGTGGGTTACTATTTTAA
PROTEIN sequence
Length: 279
MKRKSFLAYPYVVWSAIFVIIPLILVVFFSFTKESGGGYAFTLENYKEVIDPIYMKVFGRSILLAGGATLICLIVGYPVAYIISKARVSRRGSLILLFILPMWMNFLLRTYAWVAILGKNGLLNTFLGWFGIQPLAILYTNFAILLGMVYNFLPFMVLPIYTALSKMDNDLINAAHDLGANNMTVFRKIIFPLSLPGVMSGITMVFMPAVTTFAISRLLGGGKIMLVGDLIEQQFTVVGDWNFGSAISIFMMIVILISMSIMSKFGDESDKEGGGLLF*