ggKbase home page

NECEvent2014_2_3_scaffold_179_22

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(20632..20988)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix n=4 Tax=Firmicutes RepID=D7GQX4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 9.00e-58
HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 2.50e-58
Helix-turn-helix {ECO:0000313|EMBL:CKG76818.1}; Transcriptional regulator, HTH-typeTn916-like,CTn6-Orf6 {ECO:0000313|EMBL:CEJ99984.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridial similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 230
  • Evalue 1.30e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
ATGCGTAAAAAAGAAGATAAATATGATTTCAGGGCGTTGGGGCTTGCCATAAAAGAAGCCCGTAAAAAACAGGGTTTGACCCGTGAACAGGTGGGAGCAATGATTGAGATTGACCCACGCTATTTAACCAACATTGAGAATAAAGGGCAGCACCCAAGTTTACAGGTGCTTTACGACCTTGTATCTCTGCTGAATGTATCAGTGGATGAGTTTTTCTTGCCTGCCAGCAGTCAGGTGAAAAGCACCAAACGTAGGCAGTTAGAAAACAAAATAGACAATTTCACAGACGCTGACCTTGTTATTATGGAAAGCGTTGCAGATGGTATTGTCAAATCTAAGGAAGTGGGGGAAATGTAA
PROTEIN sequence
Length: 119
MRKKEDKYDFRALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFLPASSQVKSTKRRQLENKIDNFTDADLVIMESVADGIVKSKEVGEM*