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NECEvent2014_2_3_scaffold_144_21

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 20514..21530

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr (EC:2.7.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 338.0
  • Bit_score: 656
  • Evalue 5.30e-186
AAA domain family protein n=2 Tax=Clostridium difficile RepID=T2YLL0_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 659
  • Evalue 2.20e-186
AAA domain family protein {ECO:0000313|EMBL:EQE68498.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 659
  • Evalue 3.10e-186

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGTAAAAGCAGTTGGTGATATTATTGGAAAGTGCAGTGCTATTTCTTTCGATATGAAGTTAGATAAAAGCTATGATGAAGTAATTGTAGATTTTAAAAATTTAATTAATAATATAGACAATAAAGATGTATTACTATTTACAGATATGGGTTCATTAAACTCTTTTGATGAAATTATAAAGAAAGAAAAAAAGTGTGGAGTAAGAGTAATTCCTATGGTGACGACATTAACTGTGTTAGAAGCAGTTCAGAAGGCCAATATGGGATTACCTTTAAATGACGTATACAACTCTATAACTAACACGAGAAAGTACTATTTTGGAACTAATGAAATTCAAAATAAAGAAAATCTGTCTAAAACAATTATTATAGCATCACATGTTTCAGAAGGTGTAGATAATAAAACAAGAAAAATATTAGAAGAAAAGATGAGTAGGTACTTAGATGGAATAGATATTATATCTGTCCCATATAAAACAGAAAAAGATTTAAGTTTAAATATTACGAAACTTAAAGAAAGTAGTAATATTGTTGCAGTAATCAATGAACAAAGAATTAATATTAGAGGAATTGACTATATTAGCAAAAAAGATATAGATAAGGATGAAAATATCAATAAATTAAAAAATATTATAAAGATAAGTATAGGTTATGATGATGTAGTTGAAGGTTTAAAGACATCCTTAAAAAGCTCTAATTATAATAGGATATTTAAAGATATAAAATATGTGTCTGATGAATTGTTTTTAGTATTTAATATAGAAAAGAAATACGATAAAGTAATTGGACTTATGATGCATTTAGCTTTCATGGTAGATGGGTTGATTGGAAATACTAGAGAAATTGAAAAGCTTGATAAAGAAAAAACACTTGATTATCACAAGAGCCTAAGCAAAATAAAAGATATAGTATCTCAATTAGATAAAAAATATAATATAGAAATTAATGAAAAAGAGTGCTATCAAATATTATTAATATTAGAATATGCAGAAATAATCGAAAAAGATTACCAATGA
PROTEIN sequence
Length: 339
MVKAVGDIIGKCSAISFDMKLDKSYDEVIVDFKNLINNIDNKDVLLFTDMGSLNSFDEIIKKEKKCGVRVIPMVTTLTVLEAVQKANMGLPLNDVYNSITNTRKYYFGTNEIQNKENLSKTIIIASHVSEGVDNKTRKILEEKMSRYLDGIDIISVPYKTEKDLSLNITKLKESSNIVAVINEQRINIRGIDYISKKDIDKDENINKLKNIIKISIGYDDVVEGLKTSLKSSNYNRIFKDIKYVSDELFLVFNIEKKYDKVIGLMMHLAFMVDGLIGNTREIEKLDKEKTLDYHKSLSKIKDIVSQLDKKYNIEINEKECYQILLILEYAEIIEKDYQ*