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NECEvent2014_3_3_scaffold_888

Alias: 173_001_scaffold_888

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_888_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(271..744)
DNA (474bp) protein (158aa)
Coat F domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U960_ETHHY
Coat protein F {ECO:0000313|EMBL:KGG80417.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Coat F domain-containing protein
NECEvent2014_3_3_scaffold_888_2
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(953..2164)
DNA (1212bp) protein (404aa)
Glycosyl transferase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E289_9FIRM rbh
Glycosyl transferase {ECO:0000313|EMBL:CCU79700.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum s
glycosyl transferase group 1
NECEvent2014_3_3_scaffold_888_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2321..3799)
DNA (1479bp) protein (493aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; Lysine-tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZAS2_9CLOT rbh
NECEvent2014_3_3_scaffold_888_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3830..4306)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Clostridium ultunense Esp RepID=M1ZA89_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1288971 species="Bacteri
greA; transcription elongation factor GreA
NECEvent2014_3_3_scaffold_888_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4462..5259)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YW81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ94800.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_3_scaffold_888_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5444..6055)
DNA (612bp) protein (204aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
dusB; tRNA-dihydrouridine synthase B (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1Z9I0_9CLOT
Displaying 6 items

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