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NECEvent2014_3_2_scaffold_4

Alias: 173_006_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 406 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_4_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..2088)
DNA (2088bp) protein (696aa)
Hep/Hag repeat protein (Fragment) n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1X5_9FIRM rbh
Hep/Hag repeat protein {ECO:0000313|EMBL:EGL76854.1}; Flags: Fragment;; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella
YadA domain-containing protein
NECEvent2014_3_2_scaffold_4_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2505..3527)
DNA (1023bp) protein (341aa)
Biotin-dependent carboxylase domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1X4_9FIRM rbh
Biotin-dependent carboxylase domain protein {ECO:0000313|EMBL:EGL76810.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
urea amidolyase-like protein
NECEvent2014_3_2_scaffold_4_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3514..4257)
DNA (744bp) protein (248aa)
Allophanate hydrolase 2 subunit 1 n=2 Tax=Veillonella parvula RepID=T0T8D3_9FIRM rbh
TIGR00370 family protein {ECO:0000313|EMBL:EGL76847.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-
allophanate hydrolase subunit 1
NECEvent2014_3_2_scaffold_4_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4332..5528)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=3 Tax=Veillonella parvula RepID=D1BL88_VEIPT rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGL76863.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068
NECEvent2014_3_2_scaffold_4_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5655..6422)
DNA (768bp) protein (256aa)
UPF0271 protein HMPREF0874_01376 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQX8_9FIRM rbh
UPF0271 protein HMPREF0874_01376 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
LamB/YcsF family protein
NECEvent2014_3_2_scaffold_4_6
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6604..6879)
DNA (276bp) protein (92aa)
Thiamine-phosphate diphosphorylase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQX9_9FIRM
Thiamine-phosphate diphosphorylase {ECO:0000313|EMBL:EFG24225.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_
thiamine-phosphate pyrophosphorylase
NECEvent2014_3_2_scaffold_4_7
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6884..7081)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQY0_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EFG24226.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_
thiamine biosynthesis protein ThiS
NECEvent2014_3_2_scaffold_4_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7105..8409)
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLP9_9FIRM rbh
thiamine biosynthesis protein ThiC
NECEvent2014_3_2_scaffold_4_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8672..10849)
DNA (2178bp) protein (726aa)
UPI0003D650A9 related cluster n=1 Tax=unknown RepID=UPI0003D650A9 rbh
ATPase, AAA family {ECO:0000313|EMBL:ETI98192.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATPase AAA
NECEvent2014_3_2_scaffold_4_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11118..18563)
DNA (7446bp) protein (2482aa)
UPI0003D5FC76 related cluster n=1 Tax=unknown RepID=UPI0003D5FC76 rbh
YadA protein {ECO:0000313|EMBL:ETI98194.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
YadA domain-containing protein
NECEvent2014_3_2_scaffold_4_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19116..20504)
DNA (1389bp) protein (463aa)
UPI0003D64C79 related cluster n=1 Tax=unknown RepID=UPI0003D64C79 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI98195.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;
NECEvent2014_3_2_scaffold_4_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21375..22844)
DNA (1470bp) protein (490aa)
UPI0003D605A1 related cluster n=2 Tax=unknown RepID=UPI0003D605A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI98196.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;
type I restriction modification protein
NECEvent2014_3_2_scaffold_4_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22841..24319)
DNA (1479bp) protein (493aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
UPI0003D5AC8F related cluster n=2 Tax=unknown RepID=UPI0003D5AC8F rbh
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:ETI98197.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Ve
NECEvent2014_3_2_scaffold_4_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24322..26664)
DNA (2343bp) protein (781aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
UPI0003D5D1E7 related cluster n=1 Tax=unknown RepID=UPI0003D5D1E7 rbh
Type I restriction-modification system, R subunit {ECO:0000313|EMBL:ETI98198.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Ve
NECEvent2014_3_2_scaffold_4_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26795..27622)
DNA (828bp) protein (276aa)
UPI0003D60AFE related cluster n=1 Tax=unknown RepID=UPI0003D60AFE rbh
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:ETI98199.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" sour
XRE family transcriptional regulator
NECEvent2014_3_2_scaffold_4_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28016..28330
DNA (315bp) protein (105aa)
UPI0003D607BB related cluster n=1 Tax=unknown RepID=UPI0003D607BB
TrwC relaxase {ECO:0000313|EMBL:ETI98200.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
TrwC relaxase
NECEvent2014_3_2_scaffold_4_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28330..29601
DNA (1272bp) protein (424aa)
UPI0003D6629F related cluster n=1 Tax=unknown RepID=UPI0003D6629F rbh
TrwC relaxase {ECO:0000313|EMBL:ETI98201.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
TrwC relaxase
NECEvent2014_3_2_scaffold_4_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29570..29803
DNA (234bp) protein (78aa)
UPI0003D5BC8E related cluster n=1 Tax=unknown RepID=UPI0003D5BC8E
Integrase family protein {ECO:0000313|EMBL:ETI98202.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.
integrase family protein
NECEvent2014_3_2_scaffold_4_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29895..30782
DNA (888bp) protein (296aa)
UPI0003D652A7 related cluster n=2 Tax=unknown RepID=UPI0003D652A7 rbh
Integrase family protein {ECO:0000313|EMBL:ETI98203.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.
integrase family protein
NECEvent2014_3_2_scaffold_4_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30797..32056)
DNA (1260bp) protein (420aa)
UPI0003D6624B related cluster n=1 Tax=unknown RepID=UPI0003D6624B rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI98204.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;
NECEvent2014_3_2_scaffold_4_trna_9
unknown

Not on your lists

comp(32158..32231)
DNA (74bp)
transferRNA
NECEvent2014_3_2_scaffold_4_trna_8
unknown

Not on your lists

comp(32336..32406)
DNA (71bp)
transferRNA
NECEvent2014_3_2_scaffold_4_trna_7
unknown

Not on your lists

comp(32420..32493)
DNA (74bp)
transferRNA
NECEvent2014_3_2_scaffold_4_21
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32874..34079)
DNA (1206bp) protein (402aa)
NAD-dependent malic enzyme n=4 Tax=Veillonella RepID=D6KLN4_9FIRM rbh
NAD-dependent malic enzyme {ECO:0000313|EMBL:EFG22827.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
malic protein NAD-binding protein
NECEvent2014_3_2_scaffold_4_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34345..35127)
DNA (783bp) protein (261aa)
S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Veillonella RepID=D1BL65_VEIPT rbh
S-adenosylmethionine decarboxylase rbh
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF
NECEvent2014_3_2_scaffold_4_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35205..35702)
DNA (498bp) protein (166aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.
Phosphodiesterase family protein n=3 Tax=Veillonella RepID=D1YN31_9FIRM rbh
phosphodiesterase
NECEvent2014_3_2_scaffold_4_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(35769..36344)
DNA (576bp) protein (192aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=2 Tax=Veillonella parvula RepID=D1YN32_9FIRM rbh
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
NECEvent2014_3_2_scaffold_4_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(36346..37101)
DNA (756bp) protein (252aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN33_9FIRM rbh
ribonuclease PH
NECEvent2014_3_2_scaffold_4_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(37262..38683)
DNA (1422bp) protein (474aa)
Histone deacetylase family n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN34_9FIRM rbh
Histone deacetylase family {ECO:0000313|EMBL:EFB86203.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1
histone deacetylase superfamily protein
NECEvent2014_3_2_scaffold_4_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(38673..40385)
DNA (1713bp) protein (571aa)
UPI0003D5BA2E related cluster n=1 Tax=unknown RepID=UPI0003D5BA2E rbh
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:ETI98211.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11
hydantoinase/oxoprolinase
Displaying items 1-30 of 406 in total

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