ggKbase home page

NECEvent2014_8_4_scaffold_33

Alias: 178_004_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_33_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113..541
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TKK4_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23449.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_8_4_scaffold_33_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(595..1614)
DNA (1020bp) protein (340aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM95_9CLOT rbh
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EKY29066.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cel
putative glycosyltransferase protein
NECEvent2014_8_4_scaffold_33_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1683..3275)
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EX88_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia;
prfC; peptide chain release factor 3
NECEvent2014_8_4_scaffold_33_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3385..4191
DNA (807bp) protein (269aa)
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KJU72140.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
HAD hydrolase, IIB family protein
NECEvent2014_8_4_scaffold_33_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4210..5310)
DNA (1101bp) protein (367aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01
phnW; 2-aminoethylphosphonate--pyruvate transaminase PhnW (EC:2.6.1.37)
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SY23_9CLOT rbh
NECEvent2014_8_4_scaffold_33_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5324..6451)
DNA (1128bp) protein (376aa)
bcpC; phosphonopyruvate decarboxylase BcpC (EC:4.1.1.82) rbh
Phosphonopyruvate decarboxylase BcpC {ECO:0000313|EMBL:AGX41887.1}; EC=4.1.1.82 {ECO:0000313|EMBL:AGX41887.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Phosphonopyruvate decarboxylase BcpC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR63_CLOSA rbh
NECEvent2014_8_4_scaffold_33_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6454..7785)
DNA (1332bp) protein (444aa)
Phosphoenolpyruvate mutase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGK0_CLOBU
Cytidyltransferase-like protein {ECO:0000313|EMBL:AJH01391.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clo
cytidyltransferase-like protein
NECEvent2014_8_4_scaffold_33_8
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7972..8166
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T2RLW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB20831.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
hypothetical protein
NECEvent2014_8_4_scaffold_33_9
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8644..9165
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037B8255
Uncharacterized protein {ECO:0000313|EMBL:EQB20831.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
putative transposase for insertion sequence element
NECEvent2014_8_4_scaffold_33_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9427..9651
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KHS0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJU72135.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_4_scaffold_33_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9777..10385)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2E8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJU72132.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
AAA domain protein
NECEvent2014_8_4_scaffold_33_12
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10423..11187)
DNA (765bp) protein (255aa)
Cof-like hydrolase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAH0_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:ERI93785.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
HAD-superfamily hydrolase
NECEvent2014_8_4_scaffold_33_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11206..12021)
DNA (816bp) protein (272aa)
Lysophospholipase L1 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ56_9CLOT
lysophospholipase L1
Lysophospholipase L1 {ECO:0000313|EMBL:AGF56353.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum
NECEvent2014_8_4_scaffold_33_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12139..20517)
DNA (8379bp) protein (2793aa)
Putative Cyclic beta 1-2 glucan synthetase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6W4_9CLOT rbh
Putative Cyclic beta 1-2 glucan synthetase {ECO:0000313|EMBL:CDG00763.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cha
cyclic beta 1-2 glucan synthetase
NECEvent2014_8_4_scaffold_33_15
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20626..21483)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCQ7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ00660.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Transcriptional regulators of NagC/XylR family
NECEvent2014_8_4_scaffold_33_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21499..22875)
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FIV6_9CLOT rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
acyl-CoA reductase family protein
NECEvent2014_8_4_scaffold_33_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22896..23630)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96551.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_33_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23849..24739
DNA (891bp) protein (297aa)
yxkH1; putative polysaccharide deacetylase YxkH (EC:3.-.-.-)
Putative polysaccharide deacetylase YxkH {ECO:0000313|EMBL:AGX41381.1}; EC=3.-.-.- {ECO:0000313|EMBL:AGX41381.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
Putative polysaccharide deacetylase YxkH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP10_CLOSA rbh
NECEvent2014_8_4_scaffold_33_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24836..25597)
DNA (762bp) protein (254aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Pseudouridine synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKX4_9CLOT rbh
pseudouridine synthase family protein
NECEvent2014_8_4_scaffold_33_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25584..26615)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71816.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
anti-sigma factor family protein
NECEvent2014_8_4_scaffold_33_21
unknown

Not on your lists

26785..26955
DNA (171bp) protein (57aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_33_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26997..27470
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM54_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
NECEvent2014_8_4_scaffold_33_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27506..28789)
DNA (1284bp) protein (428aa)
Putative Na+/H+ antiporter family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN89_9CLOT rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KJU71814.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
C4-dicarboxylate anaerobic carrier family protein
NECEvent2014_8_4_scaffold_33_trna_3
unknown

Not on your lists

comp(28867..28939)
DNA (73bp)
transferRNA
NECEvent2014_8_4_scaffold_33_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29004..29687)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFE2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR27993.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_4_scaffold_33_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29887..30297
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCE6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71811.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_4_scaffold_33_trna_2
unknown

Not on your lists

comp(30350..30421)
DNA (72bp)
transferRNA
NECEvent2014_8_4_scaffold_33_trna_1
unknown

Not on your lists

comp(30430..30510)
DNA (81bp)
transferRNA
NECEvent2014_8_4_scaffold_33_26
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30906..32837
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6U0_9CLOT rbh
NECEvent2014_8_4_scaffold_33_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32883..33815)
DNA (933bp) protein (311aa)
Fructokinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0W9_CLOBA
fructokinase
Fructokinase {ECO:0000313|EMBL:KIL08233.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Displaying items 1-30 of 54 in total

View Taxonomy