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NECEvent2014_8_6_scaffold_78

Alias: 178_006_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_78_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

NECEvent2014_8_6_scaffold_78_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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394..1584
DNA (1191bp) protein (397aa)
hmpA; nitric oxide dioxygenase (EC:1.14.12.17)
Flavohemoprotein n=460 Tax=cellular organisms RepID=HMP_ECOLI rbh
Flavohemoprotein {ECO:0000256|HAMAP-Rule:MF_01252}; Flavohemoglobin {ECO:0000256|HAMAP-Rule:MF_01252}; Hemoglobin-like protein {ECO:0000256|HAMAP-Rule:MF_01252}; Nitric oxide dioxygenase {ECO:0000256|
NECEvent2014_8_6_scaffold_78_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1629..1967)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 1 n=1938 Tax=Enterobacteriaceae RepID=GLNB_ECO57
glnB; nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:EQN25589.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_8_6_scaffold_78_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2028..3362)
DNA (1335bp) protein (445aa)
Putative 2-component transcriptional regulator n=1 Tax=Escherichia coli M718 RepID=F4THN4_ECOLX rbh
sigma-54 dependent response regulator
AAA domain family protein {ECO:0000313|EMBL:KEN55417.1}; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_78_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..4065)
DNA (714bp) protein (238aa)
Quorum-sensing regulator protein G n=368 Tax=Enterobacteriaceae RepID=QSEG_ECO57 rbh
yfhG; hypothetical protein
YfhG lipofamily protein {ECO:0000313|EMBL:KDZ36130.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_78_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4230..5612)
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Histidine kinase n=65 Tax=Escherichia RepID=C9QPL7_ECOD1 rbh
histidine kinase
NECEvent2014_8_6_scaffold_78_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6215..10102)
DNA (3888bp) protein (1296aa)
Phosphoribosylformylglycinamidine synthase n=67 Tax=Escherichia RepID=PUR4_ECOLI rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
purL; phosphoribosylformylglycinamidine synthase rbh
NECEvent2014_8_6_scaffold_78_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10360..11916
DNA (1557bp) protein (519aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00166192};; Murein l
Membrane-bound lytic murein transglycosylase F n=541 Tax=Enterobacteriaceae RepID=MLTF_ECODH rbh
lytic transglycosylase
NECEvent2014_8_6_scaffold_78_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11913..12416)
DNA (504bp) protein (168aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
tRNA-specific adenosine deaminase n=444 Tax=Enterobacteriaceae RepID=TADA_ECOLI rbh
tRNA-specific adenosine deaminase
NECEvent2014_8_6_scaffold_78_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12474..13109)
DNA (636bp) protein (212aa)
Phosphatidylglycerophosphatase C n=468 Tax=Enterobacteriaceae RepID=PGPC_ECOLI rbh
yfhB; hypothetical protein
Haloacid dehalogenase-like hydrolase family protein {ECO:0000313|EMBL:KEO23016.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_8_6_scaffold_78_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13318..14166
DNA (849bp) protein (283aa)
Uncharacterized HTH-type transcriptional regulator YfhH n=848 Tax=Enterobacteriaceae RepID=YFHH_ECOLI rbh
yfhH; hypothetical protein
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:END91045.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_6_scaffold_78_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14222..14482
DNA (261bp) protein (87aa)
Uncharacterized ferredoxin-like protein YfhL n=620 Tax=Enterobacteriaceae RepID=YFHL_ECOLI
4Fe-4S binding protein
Ferredoxin {ECO:0000313|EMBL:EZA30007.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 s
NECEvent2014_8_6_scaffold_78_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15177..15557)
DNA (381bp) protein (127aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier-protein] synthase n=142 Tax=Escherichia RepID=ACPS_ECOBW
NECEvent2014_8_6_scaffold_78_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15557..16288)
DNA (732bp) protein (244aa)
pdxJ; Pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=729 Tax=Escherichia RepID=PDXJ_ECO57 rbh
NECEvent2014_8_6_scaffold_78_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16300..17028)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=768 Tax=Bacteria RepID=RECO_ECO45 rbh
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1001989 species="Bacteria; Proteobacteria; Ga
NECEvent2014_8_6_scaffold_78_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17040..17945)
DNA (906bp) protein (302aa)
GTPase Era n=258 Tax=Enterobacteriaceae RepID=ERA_ECOBW rbh
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_6_scaffold_78_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17942..18622)
DNA (681bp) protein (227aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1213 Tax=Enterobacteriaceae RepID=RNC_ECO24 rbh
NECEvent2014_8_6_scaffold_78_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18894..19868)
DNA (975bp) protein (325aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
Signal peptidase I n=161 Tax=Enterobacteriaceae RepID=LEP_ECOLI rbh
lepB; signal peptidase I rbh
NECEvent2014_8_6_scaffold_78_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19884..21683)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1105 Tax=Enterobacteriaceae RepID=LEPA_ECO24 rbh
lepA; GTP-binding protein LepA
NECEvent2014_8_6_scaffold_78_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21881..22360)
DNA (480bp) protein (160aa)
Protein RseC n=241 Tax=Escherichia RepID=RSEC_ECOLI rbh
rseC; SoxR reducing system protein RseC rbh
Sigma-E factor regulatory protein RseC {ECO:0000313|EMBL:EFU36565.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_8_6_scaffold_78_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22357..23313)
DNA (957bp) protein (319aa)
Sigma-E factor regulatory protein RseB n=890 Tax=Bacteria RepID=RSEB_ECO57 rbh
sigma E regulatory protein MucB/RseB
Sigma-E factor regulatory protein rseB {ECO:0000313|EMBL:EOU91301.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_8_6_scaffold_78_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23313..23963)
DNA (651bp) protein (217aa)
Anti-sigma-E factor RseA n=938 Tax=Enterobacteriaceae RepID=RSEA_ECOL6 rbh
rseA; anti-RNA polymerase sigma factor SigE
Anti-sigma-E factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Regulator of SigE {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E anti-sigma factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E factor negative reg
NECEvent2014_8_6_scaffold_78_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23996..24571)
DNA (576bp) protein (192aa)
ECF RNA polymerase sigma-E factor n=1376 Tax=Enterobacteriaceae RepID=RPOE_ECO57 rbh
rpoE; RNA polymerase, sigma 24 (sigma E) factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_6_scaffold_78_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24979..26601
DNA (1623bp) protein (541aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
L-aspartate oxidase n=85 Tax=Escherichia RepID=NADB_ECOLI rbh
nadB; L-aspartate oxidase
NECEvent2014_8_6_scaffold_78_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26586..27323)
DNA (738bp) protein (246aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=4 Tax=Escherichia coli RepID=D6ISU7_ECOLX rbh
methyltransferase small
NECEvent2014_8_6_scaffold_78_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27455..28789
DNA (1335bp) protein (445aa)
ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
ATP-dependent RNA helicase SrmB n=1254 Tax=Enterobacteriaceae RepID=C3SZ18_ECOLX rbh
ATP-dependent RNA helicase SrmB
NECEvent2014_8_6_scaffold_78_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28998..29879)
DNA (882bp) protein (294aa)
Uncharacterized HTH-type transcriptional regulator YfiE n=107 Tax=Enterobacteriaceae RepID=YFIE_ECOLI rbh
yfiE; Putative transcriptional regulator LYSR-type
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY51894.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_8_6_scaffold_78_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29982..30569
DNA (588bp) protein (196aa)
Cysteine/O-acetylserine efflux protein n=385 Tax=Enterobacteriaceae RepID=EAMB_ECOHS rbh
putative transporter
Cysteine/O-acetylserine efflux protein {ECO:0000313|EMBL:EII34979.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_8_6_scaffold_78_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30625..31008)
DNA (384bp) protein (128aa)
Autonomous glycyl radical cofactor n=873 Tax=Enterobacteriaceae RepID=GRCA_ECO24
formate C-acetyltransferase glycine radical
Autonomous glycyl radical cofactor {ECO:0000256|HAMAP-Rule:MF_00806, ECO:0000256|SAAS:SAAS00028662}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
NECEvent2014_8_6_scaffold_78_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31313..32002
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
Uracil-DNA glycosylase n=439 Tax=Bacteria RepID=UNG_ECO55 rbh
ung; uracil-DNA glycosylase rbh
Displaying items 1-30 of 37 in total

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