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NECEvent2014_4_1_scaffold_116

Alias: 174_001_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_116_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_116_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

265..4632
DNA (4368bp) protein (1456aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154};
lacZ; beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRS3_CLOP1 rbh
NECEvent2014_4_1_scaffold_116_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5006..5485
DNA (480bp) protein (160aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CUW2_CLOPF rbh
Conserved domain protein {ECO:0000313|EMBL:EDT14385.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
hypothetical protein
NECEvent2014_4_1_scaffold_116_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6022..7185
DNA (1164bp) protein (388aa)
Sodium:dicarboxylate symporter family protein n=6 Tax=Clostridium perfringens RepID=Q0TRS1_CLOP1 rbh
Probable glutamate/ aspartate transporter {ECO:0000313|EMBL:BAB80673.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
sodium:dicarboxylate symporter family protein
NECEvent2014_4_1_scaffold_116_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7518..8513
DNA (996bp) protein (332aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CV29_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17476.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_116_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8806..10716
DNA (1911bp) protein (637aa)
Putative membrane protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN78_CLOPF rbh
Putative membrane protein {ECO:0000313|EMBL:EDT24559.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
hypothetical protein
NECEvent2014_4_1_scaffold_116_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10748..12202)
DNA (1455bp) protein (485aa)
Na+/H+ antiporter n=3 Tax=Clostridium perfringens RepID=H7CV32_CLOPF rbh
Na+/H+ antiporter {ECO:0000313|EMBL:EIA17479.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Na+/H+ antiporter
NECEvent2014_4_1_scaffold_116_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12231..12851)
DNA (621bp) protein (207aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CV33_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17480.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_116_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13089..13874
DNA (786bp) protein (262aa)
Histidinol phosphate phosphatase family protein n=2 Tax=Clostridium perfringens RepID=B1BEX1_CLOPF rbh
Histidinol phosphate phosphatase family protein {ECO:0000313|EMBL:EDS81651.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
histidinol phosphatase
NECEvent2014_4_1_scaffold_116_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13905..14045)
DNA (141bp) protein (47aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CV35_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17389.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_116_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14057..14227)
DNA (171bp) protein (57aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CV36_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB80679.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_4_1_scaffold_116_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14544..15563)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CV37_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17391.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_1_scaffold_116_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15764..17704
DNA (1941bp) protein (647aa)
Tetracycline resistant protein n=2 Tax=Clostridium perfringens RepID=H7CV38_CLOPF rbh
Tetracycline resistant protein {ECO:0000313|EMBL:EIA17392.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
tetracycline resistant protein
NECEvent2014_4_1_scaffold_116_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17869..18222
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XLR5_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB80682.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
hypothetical protein
NECEvent2014_4_1_scaffold_116_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18325..20322)
DNA (1998bp) protein (666aa)
Probable potassium transport system protein kup n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN69_CLOPF rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
potassium transporter
NECEvent2014_4_1_scaffold_116_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20644..21156)
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Ferritin family protein n=7 Tax=Clostridium perfringens RepID=H7CV41_CLOPF rbh
ferritin family protein
NECEvent2014_4_1_scaffold_116_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21306..22124)
DNA (819bp) protein (273aa)
Transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CV42_CLOPF rbh
Transcriptional regulator {ECO:0000313|EMBL:EIA17396.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
transcriptional regulator
NECEvent2014_4_1_scaffold_116_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22285..24117
DNA (1833bp) protein (611aa)
Glycosyl hydrolase, family 20 n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEG1_CLOPF rbh
Glycosyl hydrolase, family 20 {ECO:0000313|EMBL:EDS81805.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str
glycosyl hydrolase family protein
NECEvent2014_4_1_scaffold_116_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24235..24702
DNA (468bp) protein (156aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CV44_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT14366.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_1_scaffold_116_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24823..25596)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBG2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT22418.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_1_scaffold_116_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25713..27134)
DNA (1422bp) protein (474aa)
Spore germination protein AF n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBG3_CLOPF rbh
Stage V sporulation protein AF {ECO:0000313|EMBL:BAB80690.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
spoVAF; stage V sporulation protein AF
NECEvent2014_4_1_scaffold_116_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27364..28872)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XLQ6_CLOPE rbh
Putatve dicarboxylate transporter {ECO:0000313|EMBL:EDT26758.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
hypothetical protein
NECEvent2014_4_1_scaffold_116_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29269..31140
DNA (1872bp) protein (624aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensory box histidine kinase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBG5_CLOPF rbh
two-component sensor histidine kinase
NECEvent2014_4_1_scaffold_116_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31364..32431
DNA (1068bp) protein (356aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CV49_CLOPF rbh
Probable regulatory protein {ECO:0000313|EMBL:BAB80693.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain
hypothetical protein
NECEvent2014_4_1_scaffold_116_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32463..33143
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=5 Tax=Clostridium perfringens RepID=H7CV50_CLOPF rbh
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EIA17404.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_4_1_scaffold_116_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33147..34025
DNA (879bp) protein (293aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDS81801.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDS81801.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridia
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=2 Tax=Clostridium perfringens RepID=B1BEG8_CLOPF rbh
NECEvent2014_4_1_scaffold_116_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34092..34826)
DNA (735bp) protein (245aa)
PP-loop family protein n=6 Tax=Clostridium perfringens RepID=Q0SU26_CLOPS rbh
ExsB family protein {ECO:0000313|EMBL:EDT26770.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
exoenzyme S synthesis protein B
NECEvent2014_4_1_scaffold_116_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35033..35779
DNA (747bp) protein (249aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=5 Tax=Clostridium perfringens RepID=H7CV53_CLOPF rbh
NECEvent2014_4_1_scaffold_116_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35846..36913)
DNA (1068bp) protein (356aa)
Oxidoreductase, 2-nitropropane dioxygenase family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2T1_CLOPF rbh
Oxidoreductase, 2-nitropropane dioxygenase family {ECO:0000313|EMBL:EDT71950.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
oxidoreductase, 2-nitropropane dioxygenase
NECEvent2014_4_1_scaffold_116_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37116..37826
DNA (711bp) protein (237aa)
Crp/FNR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CV55_CLOPF rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDT13332.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
Crp/FNR family transcriptional regulator
Displaying items 1-30 of 39 in total

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