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NECEvent2014_4_4_scaffold_22

Alias: 174_004_scaffold_22

Search features with annotation key words

Displaying items 91-113 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_22_91
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94927..96642)
DNA (1716bp) protein (572aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Sensory box histidine kinase n=5 Tax=Clostridium perfringens RepID=H7CXF2_CLOPF rbh
sensory box histidine kinase
NECEvent2014_4_4_scaffold_22_92
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96656..97360)
DNA (705bp) protein (235aa)
Multicopper polyphenol oxidase n=2 Tax=Clostridium perfringens RepID=H7CXF3_CLOPF rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_22_93
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97526..97975)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=9 Tax=Clostridium perfringens RepID=NRDR_CLOP1
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_4_4_scaffold_22_94
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98037..98309)
DNA (273bp) protein (91aa)
PRC-barrel domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXF5_CLOPF
PRC-barrel domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81466.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_22_95
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98450..99262)
DNA (813bp) protein (271aa)
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=Q8XJJ5_CLOPE rbh
sigG; sporulation sigma factor SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_4_4_scaffold_22_96
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99298..100005)
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXF7_CLOPF rbh
sigE; sporulation sigma factor SigE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str
NECEvent2014_4_4_scaffold_22_97
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100019..100825)
DNA (807bp) protein (269aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; St
Sporulation factor SpoIIGA n=6 Tax=Clostridium perfringens RepID=H7CXF8_CLOPF rbh
spoIIGA; sporulation factor SpoIIGA
NECEvent2014_4_4_scaffold_22_98
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101230..102375)
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=7 Tax=Clostridium perfringens RepID=H7CXG0_CLOPF rbh
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_4_4_scaffold_22_99
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102389..103627)
DNA (1239bp) protein (413aa)
Cell division protein FtsA n=1 Tax=Clostridium perfringens F262 RepID=H7CXG1_CLOPF rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
ftsA; cell division protein FtsA
NECEvent2014_4_4_scaffold_22_100
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103705..104757)
DNA (1053bp) protein (351aa)
Twitching motility protein PilT n=8 Tax=Clostridium perfringens RepID=H7CXG2_CLOPF rbh
pilT; twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:EDT26462.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE
NECEvent2014_4_4_scaffold_22_101
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104938..105639)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXG3_CLOPF rbh
sigK; sporulation sigma factor SigK rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_4_4_scaffold_22_102
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105702..107369)
DNA (1668bp) protein (556aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens F262 RepID=H7CXG4_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EIA16619.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
spoVD; stage V sporulation protein D
NECEvent2014_4_4_scaffold_22_103
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(107482..108108)
DNA (627bp) protein (209aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000255|HAMAP-Rule:MF_00551}; EC=2.7.1.48 {ECO:0000255|HAMAP-Rule:MF_00551};; Cytidine monophosphokinase {ECO:0000255|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000255|H
Uridine kinase n=9 Tax=Clostridium perfringens RepID=URK_CLOP1 rbh
NECEvent2014_4_4_scaffold_22_104
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(108108..109337)
DNA (1230bp) protein (410aa)
U32 family peptidase n=8 Tax=Clostridium perfringens RepID=H7CXG6_CLOPF rbh
U32 family peptidase
Peptidase, U32 family {ECO:0000313|EMBL:EDT13517.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS198
NECEvent2014_4_4_scaffold_22_105
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(109343..109987)
DNA (645bp) protein (215aa)
O-methyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CXG7_CLOPF rbh
O-methyltransferase
O-methyltransferase family protein {ECO:0000313|EMBL:EDT13504.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_4_4_scaffold_22_106
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110003..111067)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BJ85_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16623.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_22_107
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(111174..113006)
DNA (1833bp) protein (611aa)
GTP-binding protein TypA n=1 Tax=Clostridium perfringens F262 RepID=H7CXG9_CLOPF rbh
typA; GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:EIA16624.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_22_108
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113163..114908)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJI1_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81481.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_22_109
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114901..115353)
DNA (453bp) protein (151aa)
FUR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CXH1_CLOPF rbh
FUR family transcriptional regulator
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDT13506.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_4_4_scaffold_22_110
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115374..115628)
DNA (255bp) protein (85aa)
UPF0473 protein CPR_1747 n=9 Tax=Clostridium perfringens RepID=Y1747_CLOPS
hypothetical protein
UPF0473 protein HA1_10696 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_4_scaffold_22_111
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115644..116057)
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=451755 specie
Putative Holliday junction resolvase n=10 Tax=Clostridium perfringens RepID=RUVX_CLOP1
Holliday junction resolvase-like protein
NECEvent2014_4_4_scaffold_22_112
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116105..116362)
DNA (258bp) protein (86aa)
UPF0297 protein CPR_1749 n=10 Tax=Clostridium perfringens RepID=Y1749_CLOPS
hypothetical protein
UPF0297 protein AC3_2258 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_4_4_scaffold_22_113
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(116506..119145)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CXH5_CLOPF rbh
Displaying items 91-113 of 113 in total

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