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NECEvent2014_5_3_scaffold_184

Alias: 175_002_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_184_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(114..905)
DNA (792bp) protein (264aa)
Glucose 1-dehydrogenase (EC:1.1.1.47)
Glucose 1-dehydrogenase {ECO:0000313|EMBL:AAW55184.1}; EC=1.1.1.47 {ECO:0000313|EMBL:AAW55184.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
Glucose 1-dehydrogenase n=32 Tax=Staphylococcus epidermidis RepID=Q5HLZ1_STAEQ rbh
NECEvent2014_5_3_scaffold_184_2
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(933..1796)
DNA (864bp) protein (288aa)
Probable glucose uptake protein GlcU n=53 Tax=Staphylococcus epidermidis RepID=GLCU_STAEQ rbh
RhaT L-rhamnose-proton symporter family protein
Putative glucose uptake protein glcU {ECO:0000313|EMBL:ETJ14773.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_5_3_scaffold_184_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2087..4222
DNA (2136bp) protein (712aa)
DNA topoisomerase 3 {ECO:0000255|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000255|HAMAP-Rule:MF_00953};; DNA topoisomerase III {ECO:0000255|HAMAP-Rule:MF_00953}; TaxID=176280 species="Bacteria; Firmicut
topB; DNA topoisomerase III family protein (EC:5.99.1.2)
DNA topoisomerase 3 n=26 Tax=Staphylococcus epidermidis RepID=TOP3_STAES rbh
NECEvent2014_5_3_scaffold_184_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4335..5669
DNA (1335bp) protein (445aa)
Xanthine/uracil permease family protein n=39 Tax=Staphylococcus epidermidis RepID=Q5HLZ5_STAEQ rbh
xanthine/uracil permease
Putative permease {ECO:0000313|EMBL:EFE57810.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_5_3_scaffold_184_5

Not on your lists

comp(5726..6124)
DNA (399bp) protein (133aa)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HLZ6_STAEQ
Hypothetical protein SAV2252
Uncharacterized protein {ECO:0000313|EMBL:ETJ21608.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_184_6

Not on your lists


6480..6788
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=29 Tax=Staphylococcus RepID=C5QCK3_STAEP
30S ribosomal protein S10 {ECO:0000313|EMBL:ETJ21609.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpsJ; 30S ribosomal protein S10
NECEvent2014_5_3_scaffold_184_7

Not on your lists


6816..7478
DNA (663bp) protein (221aa)
50S ribosomal protein L3 n=53 Tax=Staphylococcus epidermidis RepID=C5QCK4_STAEP rbh
LSU ribosomal protein L3p (L3e)
50S ribosomal protein L3 {ECO:0000313|EMBL:ETJ21610.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_184_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


7507..8130
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=62 Tax=Staphylococcus epidermidis RepID=RL4_STAEQ rbh
LSU ribosomal protein L4p (L1e)
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_5_3_scaffold_184_9
Staphylococcus massiliensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8130..8405
DNA (276bp) protein (92aa)
50S ribosomal protein L23 n=79 Tax=Staphylococcus RepID=RL23_STAEQ
LSU ribosomal protein L23p (L23Ae)
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1229783 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus massiliensis S46.;"
NECEvent2014_5_3_scaffold_184_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8434..9267
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=40 Tax=Staphylococcus epidermidis RepID=RL2_STAEQ rbh
LSU ribosomal protein L2p (L8e)
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
NECEvent2014_5_3_scaffold_184_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9334..9612
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=84 Tax=Staphylococcus RepID=RS19_STAEQ
rpsS; ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=904802 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CO-98.;"
NECEvent2014_5_3_scaffold_184_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9640..9993
DNA (354bp) protein (118aa)
50S ribosomal protein L22 n=87 Tax=Staphylococcus RepID=RL22_STAEQ
LSU ribosomal protein L22p (L17e)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
NECEvent2014_5_3_scaffold_184_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10017..10670
DNA (654bp) protein (218aa)
30S ribosomal protein S3 n=81 Tax=Staphylococcus epidermidis RepID=RS3_STAEQ rbh
SSU ribosomal protein S3p (S3e)
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / R
NECEvent2014_5_3_scaffold_184_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10673..11107
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=77 Tax=Staphylococcus epidermidis RepID=RL16_STAEQ
LSU ribosomal protein L16p (L10e)
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_5_3_scaffold_184_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11097..11306
DNA (210bp) protein (70aa)
50S ribosomal protein L29, partial n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI00035D4F81
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
NECEvent2014_5_3_scaffold_184_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11331..11594
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=43 Tax=Staphylococcus RepID=RS17_STAEQ
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
SSU ribosomal protein S17p (S11e)
NECEvent2014_5_3_scaffold_184_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11625..11993
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=81 Tax=Staphylococcus epidermidis RepID=RL14_STAEQ
LSU ribosomal protein L14p (L23e)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus e
NECEvent2014_5_3_scaffold_184_18

Not on your lists


12035..12352
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=20 Tax=Staphylococcus epidermidis RepID=C5QCL5_STAEP
50S ribosomal protein L24 {ECO:0000313|EMBL:ETJ21621.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rplX; 50S ribosomal protein L24
NECEvent2014_5_3_scaffold_184_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


12378..12917
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=71 Tax=Staphylococcus epidermidis RepID=RL5_STAEQ rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
LSU ribosomal protein L5p (L11e)
NECEvent2014_5_3_scaffold_184_20
Staphylococcus caprae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


12940..13125
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=78 Tax=Staphylococcus RepID=RS14Z_STAEQ
SSU ribosomal protein S14p (S29e)
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=525378 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyloco
NECEvent2014_5_3_scaffold_184_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


13156..13554
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=80 Tax=Staphylococcus epidermidis RepID=RS8_STAEQ
SSU ribosomal protein S8p (S15Ae)
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
NECEvent2014_5_3_scaffold_184_22

Not on your lists


13579..14115
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=79 Tax=Staphylococcus epidermidis RepID=RL6_STAEQ rbh
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000313|EMBL:ETJ21625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_184_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


14147..14509
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=53 Tax=Staphylococcus epidermidis RepID=RL18_STAEQ
LSU ribosomal protein L18p (L5e)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_5_3_scaffold_184_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


14529..15029
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=77 Tax=Staphylococcus epidermidis RepID=RS5_STAEQ rbh
SSU ribosomal protein S5p (S2e)
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
NECEvent2014_5_3_scaffold_184_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


15046..15228
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=37 Tax=Staphylococcus epidermidis RepID=RL30_STAEQ
rpmD; ribosomal protein L30
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 /
NECEvent2014_5_3_scaffold_184_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


15245..15685
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=70 Tax=Staphylococcus RepID=RL15_STAES
rplO; ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
NECEvent2014_5_3_scaffold_184_27

Not on your lists


15685..16977
DNA (1293bp) protein (431aa)
Protein translocase subunit SecY n=51 Tax=Staphylococcus epidermidis RepID=SECY_STAEQ rbh
Preprotein translocase secY subunit (TC 3.A.5.1.1)
Protein translocase subunit SecY {ECO:0000313|EMBL:ETJ21630.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_184_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16995..17642
DNA (648bp) protein (216aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00
Adenylate kinase n=41 Tax=Staphylococcus epidermidis RepID=KAD_STAEQ rbh
NECEvent2014_5_3_scaffold_184_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17830..18048
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=98 Tax=Staphylococcus RepID=IF1_STAEQ
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(gr
NECEvent2014_5_3_scaffold_184_30
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18080..18193
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=92 Tax=Staphylococcus RepID=RL36_STAEQ
rpmJ; ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lu
Displaying items 1-30 of 38 in total

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