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NECEvent2014_5_3_scaffold_184

Alias: 175_002_scaffold_184

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Displaying items 31-38 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_184_31
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18216..18581
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=81 Tax=Staphylococcus epidermidis RepID=RS13_STAEQ
SSU ribosomal protein S13p (S18e)
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_5_3_scaffold_184_32
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18604..18993
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=68 Tax=Staphylococcus epidermidis RepID=RS11_STAEQ
SSU ribosomal protein S11p (S14e)
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;
NECEvent2014_5_3_scaffold_184_33
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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19070..20017
DNA (948bp) protein (316aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=76 Tax=Staphylococcus epidermidis RepID=RPOA_STAEQ rbh
NECEvent2014_5_3_scaffold_184_34

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20031..20399
DNA (369bp) protein (123aa)
50S ribosomal protein L17 n=64 Tax=Staphylococcus epidermidis RepID=RL17_STAEQ
LSU ribosomal protein L17p
50S ribosomal protein L17 {ECO:0000313|EMBL:ETJ21637.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_5_3_scaffold_184_35

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20694..21620
DNA (927bp) protein (309aa)
ABC transporter, ATP-binding protein n=1 Tax=Staphylococcus epidermidis M23864:W2(grey) RepID=D4FP79_STAEP rbh
Energy-coupling factor transporter ATP-binding protein EcfA 2 {ECO:0000313|EMBL:ETJ21638.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut meta
ATPase component of general energizing module of ECF transporters
NECEvent2014_5_3_scaffold_184_36
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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21692..22396
DNA (705bp) protein (235aa)
Energy-coupling factor transporter ATP-binding protein EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA2 {ECO:0000255|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000255|HAMA
ABC transporter, ATP-binding protein n=14 Tax=Staphylococcus epidermidis RepID=C5QCN3_STAEP rbh
ATPase component of general energizing module of ECF transporters
NECEvent2014_5_3_scaffold_184_37
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22386..23192
DNA (807bp) protein (269aa)
Energy-coupling factor transporter transmembrane protein EcfT n=3 Tax=Staphylococcus epidermidis RepID=F9LM94_STAEP rbh
cobalt transport family protein
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=525375 species="Bacter
NECEvent2014_5_3_scaffold_184_38
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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23196..23759
DNA (564bp) protein (188aa)
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Staphylococcus epidermidis E13A RepID=T0CRC2_STAEP rbh
Displaying items 31-38 of 38 in total

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