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NECEvent2014_5_3_scaffold_580

Alias: 175_002_scaffold_580

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_3_scaffold_580_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..281
DNA (279bp) protein (93aa)
Resistance-Nodulation-Cell Division (RND) efflux transporter n=1 Tax=Pseudomonas aeruginosa ATCC 14886 RepID=K1BYE8_PSEAI
RND efflux transporter
Multidrug resistance protein MdtB {ECO:0000313|EMBL:CDH77086.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
NECEvent2014_5_3_scaffold_580_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(458..772)
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=U6A9Y8_PSEAI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ACD39257.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_5_3_scaffold_580_3
unknown

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comp(1007..1210)
DNA (204bp) protein (68aa)

This feature has no annotations

NECEvent2014_5_3_scaffold_580_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1207..1455)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QMU6_PSEAI
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD44249.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_5_3_scaffold_580_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1466..1849)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QMB4_PSEAI
LuxR family regulatory protein {ECO:0000313|EMBL:ACD39254.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ae
LuxR family transcriptional regulator
NECEvent2014_5_3_scaffold_580_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2190..3131)
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QPK9_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD56678.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Hypothetical protein
NECEvent2014_5_3_scaffold_580_7
Escherichia phage vB_EcoM-ep3, Caudovirales, Viruses

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comp(3097..3795)
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QJ19_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:AIM50582.1}; TaxID=1541883 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Escherichia phage vB_EcoM-ep3.;"
hypothetical protein
NECEvent2014_5_3_scaffold_580_8

Not on your lists

comp(4044..4337)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QIZ6_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KKK85338.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NECEvent2014_5_3_scaffold_580_9
Pseudomonas phage phi297, Caudovirales, Viruses

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comp(4355..4645)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QMU2_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:AEX55824.1}; TaxID=1129145 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage phi297.;"
hypothetical protein
NECEvent2014_5_3_scaffold_580_10
unknown

Not on your lists

comp(4724..5056)
DNA (333bp) protein (111aa)

This feature has no annotations

NECEvent2014_5_3_scaffold_580_11
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5188..6282)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QMA9_PSEAI rbh
Restriction endonuclease or methylase {ECO:0000313|EMBL:ERH50966.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
hypothetical protein rbh
NECEvent2014_5_3_scaffold_580_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6378..7097)
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8QPK5_PSEAI rbh
Repressor protein cI {ECO:0000313|EMBL:ETD57003.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
repressor protein cI
NECEvent2014_5_3_scaffold_580_13
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7193..7405
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KKM9_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY99333.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida
NECEvent2014_5_3_scaffold_580_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7559..8263
DNA (705bp) protein (235aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8QJ17_PSEAI rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ACD38955.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_5_3_scaffold_580_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8328..8654
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA02 RepID=R8Z911_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:ACD38954.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
hypothetical protein
Displaying 15 items

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