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NECEvent2014_10_1_scaffold_22_58

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(61114..62751)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 545.0
  • Bit_score: 1033
  • Evalue 0.0
Ribonuclease Y n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EH05_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 545.0
  • Bit_score: 1033
  • Evalue 0.0
  • rbh
ymdA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 545.0
  • Bit_score: 1032
  • Evalue 0.0

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1638
ATGAATAATATGTTAACAATTATGATTCCCGTCGCAACTGCCATTGTTTCACTCTTGGTGGGTTCAGTGGTTGGTTATGCAATTCGCAAGCATTCTTGGGAACAAAAAGCTCAAAATGCCCAGAATGATGCTGACCACATTTTAGCTGATGCTAAGGCACAGGTTGCTGCAGCACAAGCTGAAGTTAATGCACAAAAGCAAGCAGCAGCGGCTGTTAAGCAAAGTGCAGAAAATACTAAAAAAGAAAAAATTCTTGAAGCTCAAGAACAAATTCGTGATTTTAGGCAAAAGACCGAGGATGAGTTAAATTCCAAGAAAGATAATTTAGCTCGGGAGAAAAATCGTTTACAACAACGTGAAGATACCTTAGATCATAAAAATTCTTTATTAGATGAACGTGAAAGTGGACTCACGCAGAAGGAAGACCAATTAAAGCAGCAGGATGCTAGCTTAAAGGCAAAATTAACTGAGGCTGAAGAATTAGTAGAAACTAGACGGCAAAAGCTTTATGACGTAGCTAAGTTGGATGAGGAAGAAGCCAAGAAGATTGTGCTTAGTCAATTATCTGATGAACTAGTCAAAGAACGAGCCGAGATGATCAGAAATAGTAACGAAGAAGTAAAAGCTAAAGCTGATCATTATGCTAATCAGGTCATTGTGGATGCTATTCAAAGTAGCGCGGCAGATACAGTTGCCGAAACAACTGTATCTGTTGTTGATCTGCCAAATGAAGAGATGAAGGGACGGATTATTGGTCGTGAAGGACGCAATATCCGTTCATTTGAAGCTTTGACTGGAATAGATCTAATTATTGATGATACGCCAAAGGTTGTTACCTTGAGTGGTTTTGATCCAATTAGACGTGAAATTGCCAAAAGAGCGATGGAACGCTTAATCAAGGATGGCCACATTCACCCAGCTAGAATTGAAGAAATGGTCGATAAGGCCAGAAAAGAAGTTAACGATGACATCTATGAAGCAGGTGAAAGTGCTTTGATGGAGCTGGGAATTCACCGGATGAATCCTGAATTAGTTAAGACGCTAGGTCGTCTTAAATATCGTACTTCTTATGGACAAAATGTTTTGTCACATTCAATTGAAGTTGGTAAGCTAGCAGGCACGATGGCTGCAGAATTAGGCTTGGATGAAAAATTAGCAGTTCGCGCGGGGTTATTACACGATATTGGTAAAGCCATCGATCATGATATTGAAGGTTCCCATGTAGAAATTGGGGTTGAACTAACTCGGAAATATCATGAACCAGATGTTGTAGTAAATGCGATTGCTGCACACCACGGCGATGTGCCTAAGTTGTCGTTTATTGCTGAACTTGTTGTTGCAGCAGATACGATTTCTAGTGCTCGTCCTGGTGCAAGAAGCGAGAGTTTGGAAAATTATATTAGACGTTTGACCGAATTGGAAAAGATTGCTAAGAGCTATCAAGGCGTTAAGCAAGCTTATGCAATTCAAGCGGGACGCGAAGTGCGTGTGATGGTTGAACCTGACGAAATTTCAGATGATCGGACAGTTATTTTGGCACGTGATATTCGTAATCAGGTTGAAAAAGAACTTGATTATCCAGGTAATATTAAGATTACCGTTATCCGTGAAAAAAGAGTTGTGGCGATCGCTAAATAA
PROTEIN sequence
Length: 546
MNNMLTIMIPVATAIVSLLVGSVVGYAIRKHSWEQKAQNAQNDADHILADAKAQVAAAQAEVNAQKQAAAAVKQSAENTKKEKILEAQEQIRDFRQKTEDELNSKKDNLAREKNRLQQREDTLDHKNSLLDERESGLTQKEDQLKQQDASLKAKLTEAEELVETRRQKLYDVAKLDEEEAKKIVLSQLSDELVKERAEMIRNSNEEVKAKADHYANQVIVDAIQSSAADTVAETTVSVVDLPNEEMKGRIIGREGRNIRSFEALTGIDLIIDDTPKVVTLSGFDPIRREIAKRAMERLIKDGHIHPARIEEMVDKARKEVNDDIYEAGESALMELGIHRMNPELVKTLGRLKYRTSYGQNVLSHSIEVGKLAGTMAAELGLDEKLAVRAGLLHDIGKAIDHDIEGSHVEIGVELTRKYHEPDVVVNAIAAHHGDVPKLSFIAELVVAADTISSARPGARSESLENYIRRLTELEKIAKSYQGVKQAYAIQAGREVRVMVEPDEISDDRTVILARDIRNQVEKELDYPGNIKITVIREKRVVAIAK*