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NECEvent2014_10_1_scaffold_488_2

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(412..651)

Top 3 Functional Annotations

Value Algorithm Source
Rhamnogalacturonate lyase precursor (EC:4.2.2.-) similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 75.0
  • Bit_score: 71
  • Evalue 1.00e-10
Rhamnogalacturonate lyase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4P4_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 79.0
  • Bit_score: 167
  • Evalue 4.80e-39
Putative rhamnogalacturonate lyase {ECO:0000313|EMBL:KJY66266.1}; TaxID=1218494 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helsin similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 75.0
  • Bit_score: 71
  • Evalue 5.00e-10

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Taxonomy

Lactobacillus helsingborgensis → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 240
ATGTTATCTAAATTAAAAGACCACATAGAAGATAGTAATAAAGAATTATCTTTAAGCAATAATGAAGTACAAATAACTTTCACTAAACAAGGCTATGTCACAAAGCTACTGTATAAAGGAAAAAATGTCTTAGAAGACTTAGCAGGTGAACCTCATGATCCCGATAAAAATTATAGTTTCTATTGCGATTATCATATGGATGGAAAAACAAGACATATGCATATTGATCAAACAAATTGA
PROTEIN sequence
Length: 80
MLSKLKDHIEDSNKELSLSNNEVQITFTKQGYVTKLLYKGKNVLEDLAGEPHDPDKNYSFYCDYHMDGKTRHMHIDQTN*