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NECEvent2014_7_3_scaffold_137

Alias: 177_003_scaffold_137

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_137_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=3 Tax=Escherichia coli RepID=L3Y4X1_ECOLX
rumA; 23S rRNA (uracil-5-)-methyltransferase
NECEvent2014_7_3_scaffold_137_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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168..2924
DNA (2757bp) protein (919aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
Signal transduction histidine-protein kinase BarA n=4 Tax=Escherichia coli RepID=D7Y8U1_ECOLX rbh
barA; hybrid sensory histidine kinase, in two-component regulatory system with UvrY
NECEvent2014_7_3_scaffold_137_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3156..4496)
DNA (1341bp) protein (447aa)
Glucarate dehydratase n=351 Tax=Escherichia RepID=GUDD_ECO57 rbh
glucarate dehydratase
Glucarate dehydratase {ECO:0000313|EMBL:AJA27753.1}; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_3_scaffold_137_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4517..5857)
DNA (1341bp) protein (447aa)
Glucarate dehydratase-related protein n=109 Tax=Escherichia RepID=GUDX_ECOLI rbh
gudX; putative glucarate dehydratase
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:KDZ36487.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
NECEvent2014_7_3_scaffold_137_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5859..7211)
DNA (1353bp) protein (451aa)
Probable glucarate transporter n=134 Tax=Escherichia RepID=GUDP_ECOLI rbh
gudP; putative D-glucarate transporter
D-glucarate permease {ECO:0000313|EMBL:AEJ58115.1}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_7_3_scaffold_137_6
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7646..8095)
DNA (450bp) protein (150aa)
Uncharacterized protein YqcA n=623 Tax=Enterobacteriaceae RepID=YQCA_ECO57 rbh
yqcA; flavodoxin
Flavodoxin family protein {ECO:0000313|EMBL:EIQ34995.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii
NECEvent2014_7_3_scaffold_137_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8113..8895)
DNA (783bp) protein (261aa)
truC; tRNA pseudouridine synthase C (EC:5.4.99.-)
tRNA pseudouridine synthase C {ECO:0000313|EMBL:CDK82131.1}; EC=4.2.1.70 {ECO:0000313|EMBL:CDK82131.1};; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
tRNA pseudouridine synthase C n=427 Tax=Enterobacteriaceae RepID=TRUC_ECOLI rbh
NECEvent2014_7_3_scaffold_137_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8895..9224)
DNA (330bp) protein (110aa)
Uncharacterized protein YqcC n=470 Tax=Enterobacteriaceae RepID=YQCC_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD64474.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_137_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9846..10391)
DNA (546bp) protein (182aa)
Protein Syd n=912 Tax=Enterobacteriaceae RepID=SYDP_ECO24 rbh
Syd family protein
Protein Syd {ECO:0000256|HAMAP-Rule:MF_01104, ECO:0000256|SAAS:SAAS00064630}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_7_3_scaffold_137_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10459..11307
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=82 Tax=Enterobacteriaceae RepID=QUEF_ECOHS rbh
queF; 7-cyano-7-deazaguanine reductase rbh
NECEvent2014_7_3_scaffold_137_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11419..12783
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57 rbh
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_3_scaffold_137_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13340..14629
DNA (1290bp) protein (430aa)
Serine transporter n=958 Tax=Bacteria RepID=SDAC_ECO57 rbh
serine transporter
Serine transporter {ECO:0000313|EMBL:EOW04477.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli K
NECEvent2014_7_3_scaffold_137_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14687..16054
DNA (1368bp) protein (456aa)
sdaB; L-serine deaminase II (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:KEN54462.1}; EC=4.3.1.17 {ECO:0000313|EMBL:KEN54462.1};; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
L-serine dehydratase 2 n=366 Tax=Enterobacteriaceae RepID=A7ZQP1_ECO24 rbh
NECEvent2014_7_3_scaffold_137_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16076..16921
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS
Flap endonuclease Xni n=171 Tax=Enterobacteriaceae RepID=C6EJ73_ECOBD rbh
xni; exonuclease IX
NECEvent2014_7_3_scaffold_137_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16976..18124)
DNA (1149bp) protein (383aa)
fucO; L-1,2-propanediol oxidoreductase (EC:1.1.1.77)
Lactaldehyde reductase {ECO:0000313|EMBL:KEN98296.1}; EC=1.1.1.77 {ECO:0000313|EMBL:KEN98296.1};; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
Lactaldehyde reductase n=852 Tax=Enterobacteriaceae RepID=FUCO_ECO57 rbh
NECEvent2014_7_3_scaffold_137_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18152..18799)
DNA (648bp) protein (216aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17) rbh
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=1125638 specie
L-fuculose phosphate aldolase n=446 Tax=Enterobacteriaceae RepID=FUCA_ECO57 rbh
Displaying 16 items

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