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ACDPROT_12_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
69.7 152.0 205 1.50e-50 spiu:SPICUR_03170
GREAB_2 (db=PatternScan db_id=PS00830 from=115 to=131 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
null null null 0.0 spiu:SPICUR_03170
GREAB_1 (db=PatternScan db_id=PS00829 from=12 to=43 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
null null null 0.0 spiu:SPICUR_03170
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=1 to=150 evalue=2.4e-75 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
null null null 2.40e-75 spiu:SPICUR_03170
GreA_GreB_N (db=HMMPfam db_id=PF03449 from=1 to=69 evalue=2.4e-30 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 2.40e-30 spiu:SPICUR_03170
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=1 to=74 evalue=2.1e-27 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: superfamily
null null null 2.10e-27 spiu:SPICUR_03170
GreA_GreB (db=HMMPfam db_id=PF01272 from=78 to=151 evalue=3.9e-25 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 3.90e-25 spiu:SPICUR_03170
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=1 to=70 evalue=1.2e-24 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
null null null 1.20e-24 spiu:SPICUR_03170
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=71 to=152 evalue=1.5e-23 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
null null null 1.50e-23 spiu:SPICUR_03170
FKBP-like (db=superfamily db_id=SSF54534 from=75 to=152 evalue=1.6e-22) iprscan interpro
DB: superfamily
null null null 1.60e-22 spiu:SPICUR_03170
GreA_GreB (db=HAMAP db_id=MF_00105 from=1 to=151 evalue=25.229) iprscan interpro
DB: HAMAP
null null null 2.52e+01 spiu:SPICUR_03170
greA; transcription elongation factor GreA Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated UNIPROT
DB: UniProtKB
79.6 152.0 243 1.80e-61 ggdbv1_87985608
Transcription elongation factor GreA n=2 Tax=Thioalkalivibrio RepID=L0E289_THIND similarity UNIREF
DB: UNIREF90
68.6 null 203 4.70e-50 spiu:SPICUR_03170