Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
greA; transcription elongation factor GreA | similarity |
KEGG
DB: KEGG |
69.7 | 152.0 | 205 | 1.50e-50 | spiu:SPICUR_03170 |
GREAB_2 (db=PatternScan db_id=PS00830 from=115 to=131 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | spiu:SPICUR_03170 |
GREAB_1 (db=PatternScan db_id=PS00829 from=12 to=43 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | spiu:SPICUR_03170 |
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=1 to=150 evalue=2.4e-75 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.40e-75 | spiu:SPICUR_03170 |
GreA_GreB_N (db=HMMPfam db_id=PF03449 from=1 to=69 evalue=2.4e-30 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.40e-30 | spiu:SPICUR_03170 |
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=1 to=74 evalue=2.1e-27 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-27 | spiu:SPICUR_03170 |
GreA_GreB (db=HMMPfam db_id=PF01272 from=78 to=151 evalue=3.9e-25 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-25 | spiu:SPICUR_03170 |
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=1 to=70 evalue=1.2e-24 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-24 | spiu:SPICUR_03170 |
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=71 to=152 evalue=1.5e-23 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.50e-23 | spiu:SPICUR_03170 |
FKBP-like (db=superfamily db_id=SSF54534 from=75 to=152 evalue=1.6e-22) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.60e-22 | spiu:SPICUR_03170 |
GreA_GreB (db=HAMAP db_id=MF_00105 from=1 to=151 evalue=25.229) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.52e+01 | spiu:SPICUR_03170 |
greA; transcription elongation factor GreA Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated |
UNIPROT
DB: UniProtKB |
79.6 | 152.0 | 243 | 1.80e-61 | ggdbv1_87985608 | |
Transcription elongation factor GreA n=2 Tax=Thioalkalivibrio RepID=L0E289_THIND | similarity |
UNIREF
DB: UNIREF90 |
68.6 | null | 203 | 4.70e-50 | spiu:SPICUR_03170 |