Alias: ACDPROT_3276.22849.9
name | lists | location/seqs | annotations | notes |
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ACDPROT_12_1
R_Gammaproteobacteria_45_12, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(249..878)
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Ribosomal RNA large subunit methyltransferase E n=5 Tax=Pseudomonas RepID=RLME_PSEE4 (db=UNIREF evalue=8.0e-72 bit_score=273.0 identity=60.68 coverage=97.6190476190476)
rrmJ; 23S rRNA methyltransferase
23S ribosomal RNA methyltransferase (db=HMMPIR db_id=PIRSF005461 from=2 to=207 evalue=5.0e-106 interpro_id=IPR016448 interpro_description=23S ribosomal RNA methyltransferase GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: RNA methyltransferase activity (GO:0008173))
RIBOSOMAL RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10920 from=15 to=204 evalue=6.6e-65 interpro_id=IPR015507 interpro_description=Ribosomal RNA methyltransferase J GO=Molecular Function: methyltransferase activity (GO:0008168), Biological Process: rRNA methylation (GO:0031167))
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ACDPROT_12_2
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(879..1337)
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greA; transcription elongation factor GreA
GREAB_2 (db=PatternScan db_id=PS00830 from=115 to=131 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GREAB_1 (db=PatternScan db_id=PS00829 from=12 to=43 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=1 to=150 evalue=2.4e-75 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACDPROT_12_3
R_Gammaproteobacteria_38_14, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1368..2486)
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chaperone protein DnaJ
chaperone protein DnaJ
Chaperone protein dnaJ n=1 Tax=Beggiatoa sp. PS RepID=A7BR59_9GAMM (db=UNIREF evalue=6.0e-119 bit_score=431.0 identity=60.43 coverage=99.4638069705094)
seg (db=Seg db_id=seg from=228 to=237)
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ACDPROT_12_4
R_Gammaproteobacteria_38_14, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2618..3136)
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chaperone protein DnaK
seg (db=Seg db_id=seg from=131 to=151)
coiled-coil (db=Coil db_id=coil from=89 to=110 evalue=NA)
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ACDPROT_12_5
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4681..5241)
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grpE; Heat-shock protein GrpE(HSP-70 cofactor) (EC:5.1.3.1)
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
GRPE (db=PatternScan db_id=PS01071 from=138 to=181 evalue=0.0 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
GrpE (db=HMMPfam db_id=PF01025 from=23 to=183 evalue=2.7e-49 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
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ACDPROT_12_6
unknown
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Not on your lists |
comp(5362..5481)
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This feature has no annotations |
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ACDPROT_12_7
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5420..6307)
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ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] (db=KEGG evalue=2.0e-85 bit_score=318.0 identity=53.15 coverage=96.2837837837838)
Probable inorganic polyphosphate/ATP-NAD kinase n=6 Tax=Coxiella burnetii RepID=PPNK_COXB1 (db=UNIREF evalue=1.0e-84 bit_score=317.0 identity=53.15 coverage=96.2837837837838)
NAD kinase (db=superfamily db_id=SSF111331 from=6 to=294 evalue=5.6e-87 interpro_id=IPR016064 interpro_description=ATP-NAD kinase, PpnK-type GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
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ACDPROT_12_8
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6312..7979)
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DNA repair protein RecN n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRB1_9GAMM (db=UNIREF evalue=8.0e-118 bit_score=428.0 identity=42.03 coverage=98.7410071942446)
recN; ATPases involved in DNA repair; K03631 DNA repair protein RecN (Recombination protein N) (db=KEGG evalue=2.0e-112 bit_score=410.0 identity=41.73 coverage=98.9208633093525)
seg (db=Seg db_id=seg from=437 to=449)
coiled-coil (db=Coil db_id=coil from=160 to=181 evalue=NA)
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ACDPROT_12_9
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7994..8602)
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carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1] (db=KEGG evalue=2.0e-79 bit_score=298.0 identity=66.5 coverage=98.0295566502463)
Carbonic anhydrase n=5 Tax=Coxiella burnetii RepID=A9KEQ9_COXBN (db=UNIREF evalue=2.0e-79 bit_score=298.0 identity=66.5 coverage=98.0295566502463)
beta-carbonic anhydrase, cab (db=superfamily db_id=SSF53056 from=2 to=201 evalue=1.1e-49 interpro_id=IPR001765 interpro_description=Carbonic anhydrase GO=Molecular Function: carbonate dehydratase activity (GO:0004089), Molecular Function: zinc ion binding (GO:0008270), Biological Process: carbon utilization (GO:0015976))
CARBONIC ANHYDRASE (db=HMMPanther db_id=PTHR11002 from=8 to=199 evalue=9.4e-49 interpro_id=IPR001765 interpro_description=Carbonic anhydrase GO=Molecular Function: carbonate dehydratase activity (GO:0004089), Molecular Function: zinc ion binding (GO:0008270), Biological Process: carbon utilization (GO:0015976))
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ACDPROT_12_10
unknown
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Not on your lists |
comp(8602..8703)
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This feature has no annotations |
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ACDPROT_12_11
unknown
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Not on your lists |
comp(8755..9396)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=123)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=165)
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ACDPROT_12_12 |
Not on your lists |
comp(9497..10666)
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hypothetical protein (db=KEGG evalue=1.0e-13 bit_score=81.3 identity=29.95 coverage=49.4871794871795)
UPI00026C7BE7 related cluster n=1 Tax=unknown RepID=UPI00026C7BE7
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ACDPROT_12_13
R_Gammaproteobacteria_38_14, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10673..11086)
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Ferric-uptake regulator n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5BY75_NITHN (db=UNIREF evalue=4.0e-52 bit_score=206.0 identity=67.38 coverage=97.8260869565217)
ferric-uptake regulator
FUR (db=HMMPfam db_id=PF01475 from=8 to=128 evalue=4.2e-47 interpro_id=IPR002481 interpro_description=Ferric-uptake regulator GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=133 evalue=9.8e-42)
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ACDPROT_12_14
Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11120..11458)
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SmpA/OmlA; K06186 small protein A (db=KEGG evalue=2.0e-11 bit_score=71.2 identity=41.77 coverage=69.0265486725664)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=32)
seg (db=Seg db_id=seg from=16 to=30)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=37 to=49 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
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ACDPROT_12_15
R_Gammaproteobacteria_36_30, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11455..11745)
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hypothetical protein
UPF0125 (db=HMMPfam db_id=PF03658 from=6 to=88 evalue=2.6e-32 interpro_id=IPR005346 interpro_description=Uncharacterised protein family UPF0125)
UPF0125_RnfH (db=HAMAP db_id=MF_00460 from=6 to=92 evalue=23.823)
hypothetical cytosolic protein; K09801 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_36_30_curated
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ACDPROT_12_16
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11732..12169)
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oligoketide cyclase/lipid transport protein
no description (db=Gene3D db_id=G3DSA:3.30.530.30 from=1 to=144 evalue=6.7e-45)
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=144 evalue=2.8e-30)
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ACDPROT_12_17
Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12208..12672)
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smpB; SsrA-binding protein; K03664 SsrA-binding protein (db=KEGG evalue=3.0e-59 bit_score=229.0 identity=72.73 coverage=98.0645161290323)
SsrA-binding protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNW1_THISH (db=UNIREF evalue=4.0e-59 bit_score=229.0 identity=72.73 coverage=98.0645161290323)
SSRP (db=PatternScan db_id=PS01317 from=29 to=41 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site)
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=10 to=153 evalue=2.1e-78 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
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ACDPROT_12_18
Methanobacterium sp., Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea
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Not on your lists |
comp(13292..14224)
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Methyltransferase type 11 n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=D3NIV4_9FIRM (db=UNIREF evalue=7.0e-10 bit_score=68.2 identity=28.77 coverage=64.3086816720257)
trans-aconitate 2-methyltransferase (EC:2.1.1.144); K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144] (db=KEGG evalue=4.0e-09 bit_score=65.9 identity=27.27 coverage=51.1254019292604)
seg (db=Seg db_id=seg from=75 to=85)
seg (db=Seg db_id=seg from=286 to=298)
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ACDPROT_12_19
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14646..15059)
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Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUE2_9GAMM (db=UNIREF evalue=2.0e-17 bit_score=91.7 identity=39.82 coverage=80.4347826086957)
hypothetical protein
seg (db=Seg db_id=seg from=117 to=135)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=46 to=123 evalue=1.3e-06)
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ACDPROT_12_20
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15072..15422)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_34_curated
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6VSA2_9PROT
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ACDPROT_12_21
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria
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Not on your lists |
comp(15722..16099)
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hypothetical protein (db=KEGG evalue=8.0e-17 bit_score=89.0 identity=50.57 coverage=68.2539682539683)
DUF1778 (db=HMMPfam db_id=PF08681 from=41 to=120 evalue=1.8e-26 interpro_id=IPR014795 interpro_description=Protein of unknown function DUF1778)
no description (db=Gene3D db_id=G3DSA:1.20.5.780 from=35 to=123 evalue=4.0e-23)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=37 to=116 evalue=8.1e-20 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription (GO:0045449))
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ACDPROT_12_22
Oscillatoria sp. PCC 6506, Oscillatoria, Oscillatoriales, Cyanobacteria, Bacteria
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Not on your lists |
comp(16096..16617)
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acetyltransferase (GNAT) family protein (db=KEGG evalue=1.0e-31 bit_score=139.0 identity=46.15 coverage=88.5057471264368)
seg (db=Seg db_id=seg from=136 to=144)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=22 to=153 evalue=4.5e-07 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FU85_9CYAN
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ACDPROT_12_23
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16646..17914)
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ndh; pyridine nucleotide-disulfide oxidoreductase (EC:1.6.99.3)
ndh; pyridine nucleotide-disulfide oxidoreductase (EC:1.6.99.3)
UPI0001D5B9ED related cluster n=1 Tax=unknown RepID=UPI0001D5B9ED (db=UNIREF evalue=4.0e-112 bit_score=408.0 identity=51.49 coverage=93.6170212765958)
transmembrane_regions (db=TMHMM db_id=tmhmm from=378 to=400)
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ACDPROT_12_24
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(17911..18900)
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hypothetical protein
DUF393 (db=HMMPfam db_id=PF04134 from=13 to=120 evalue=7.5e-07 interpro_id=IPR007263 interpro_description=Putative thiol-disulphide oxidoreductase DCC)
UPI00026C784C related cluster n=1 Tax=unknown RepID=UPI00026C784C
Uncharacterized protein {ECO:0000313|EMBL:CDZ77365.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensi
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ACDPROT_12_25
unknown
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Not on your lists |
comp(19418..19756)
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This feature has no annotations |
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ACDPROT_12_26
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20101..20784)
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hypothetical protein (db=KEGG evalue=1.0e-68 bit_score=262.0 identity=60.09 coverage=92.9824561403509)
Uncharacterized protein n=4 Tax=Coxiella burnetii RepID=B6J6D7_COXB1
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ACDPROT_12_27
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20777..21643)
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hypothetical protein (db=KEGG evalue=2.0e-105 bit_score=385.0 identity=67.6 coverage=98.961937716263)
Putative uncharacterized protein n=2 Tax=Coxiella burnetii RepID=A9KDX9_COXBN (db=UNIREF evalue=3.0e-105 bit_score=385.0 identity=67.6 coverage=98.961937716263)
seg (db=Seg db_id=seg from=123 to=136)
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ACDPROT_12_28
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(22109..22885)
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hypothetical protein (db=KEGG evalue=3.0e-116 bit_score=421.0 identity=75.97 coverage=99.2277992277992)
3',5'-cyclic nucleotide phosphodiesterase n=2 Tax=Legionella pneumophila RepID=D5TEL6_LEGPN (db=UNIREF evalue=6.0e-116 bit_score=420.0 identity=74.9 coverage=99.6138996138996)
PDEase_II (db=HMMPfam db_id=PF02112 from=23 to=258 evalue=5.0e-51 interpro_id=IPR000396 interpro_description=Cyclic-AMP phosphodiesterase, class-II GO=Molecular Function: 3',5'-cyclic-AMP phosphodiesterase activity (GO:0004115), Biological Process: cAMP catabolic process (GO:0006198))
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