ggKbase home page

ACDOP11_49

Alias: ACDOP11_44307.17087.9

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_49_1
ACD50, ACD50, ACD50, ACD50, Microgenomates, Bacteria

Not on your lists

comp(3..995)
DNA (993bp) protein (331aa)
seg (db=Seg db_id=seg from=44 to=55)
seg (db=Seg db_id=seg from=166 to=176)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
ACDOP11_49_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(967..2088)
DNA (1122bp) protein (374aa)
glycosyl transferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=4 to=370 evalue=1.1e-65)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=371 evalue=6.8e-45)
Glycos_transf_1 (db=HMMPfam db_id=PF00534 from=190 to=350 evalue=1.6e-30 interpro_id=IPR001296 interpro_description=Glycosyl transferase, group 1 GO=Biological Process: biosynthetic process (GO:0009058))
ACDOP11_49_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2090..3409)
DNA (1320bp) protein (440aa)
glycosyl transferase family protein
Glycosyl transferase family 39 n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KDP4_CYAP7 (db=UNIREF evalue=2.0e-39 bit_score=167.0 identity=31.35 coverage=81.3636363636364)
transmembrane_regions (db=TMHMM db_id=tmhmm from=281 to=303)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=329)
ACDOP11_49_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(3394..4176)
DNA (783bp) protein (261aa)
Glycosyl transferase, family 2
Glycosyl transferase, family 2 n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12TX6_METBU (db=UNIREF evalue=1.0e-39 bit_score=166.0 identity=39.84 coverage=92.3371647509579)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=11 to=244 evalue=3.4e-35)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=18 to=246 evalue=2.7e-28)
ACDOP11_49_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(4154..5311)
DNA (1158bp) protein (386aa)
capsular polysaccharide biosynthesis protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=355 to=377)
transmembrane_regions (db=TMHMM db_id=tmhmm from=331 to=350)
transmembrane_regions (db=TMHMM db_id=tmhmm from=302 to=324)
ACDOP11_49_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(5406..5981)
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] (db=KEGG evalue=7.0e-20 bit_score=100.0 identity=39.35 coverage=75.5208333333333)
RmlC-like cupins (db=superfamily db_id=SSF51182 from=14 to=188 evalue=2.8e-20 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (db=HMMPanther db_id=PTHR21047 from=2 to=156 evalue=8.5e-20 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=15 to=166 evalue=6.9e-11 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACDOP11_49_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(6021..7061)
DNA (1041bp) protein (347aa)
group 1 glycosyl transferase
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=344 evalue=2.0e-61)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=344 evalue=2.0e-61)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=19 to=344 evalue=2.4e-61)
ACDOP11_49_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(7181..8815)
DNA (1635bp) protein (545aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=215 to=237)
transmembrane_regions (db=TMHMM db_id=tmhmm from=280 to=302)
ACDOP11_49_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(8808..9884)
DNA (1077bp) protein (359aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=331 to=353)
transmembrane_regions (db=TMHMM db_id=tmhmm from=304 to=321)
transmembrane_regions (db=TMHMM db_id=tmhmm from=280 to=297)
ACDOP11_49_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9881..10456)
DNA (576bp) protein (192aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
coiled-coil 127..148 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACDOP11_49_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10417..11409)
DNA (993bp) protein (331aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
galE: UDP-glucose 4-epimerase (db=HMMTigr db_id=TIGR01179 from=2 to=327 evalue=1.5e-142 interpro_id=IPR005886 interpro_description=UDP-glucose 4-epimerase GO=Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978), Biological Process: galactose metabolic process (GO:0006012))
UDP-GLUCOSE 4-EPIMERASE (db=HMMPanther db_id=PTHR10366:SF39 from=5 to=323 evalue=6.2e-122 interpro_id=IPR005886 interpro_description=UDP-glucose 4-epimerase GO=Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978), Biological Process: galactose metabolic process (GO:0006012))
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=323 evalue=6.2e-122)
ACDOP11_49_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(11485..12396)
DNA (912bp) protein (304aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACDOP11_49_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(12393..13175)
DNA (783bp) protein (261aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACDOP11_49_14
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(13242..14012)
DNA (771bp) protein (257aa)
lipopolysaccharide biosynthesis glycosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
seg (db=Seg db_id=seg from=93 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
ACDOP11_49_15
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(13988..15607)
DNA (1620bp) protein (540aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=297 to=319)
transmembrane_regions (db=TMHMM db_id=tmhmm from=268 to=290)
ACDOP11_49_16
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(15624..16262)
DNA (639bp) protein (213aa)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=200 evalue=3.7e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=45 to=212 evalue=3.1e-29)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=50 to=143 evalue=7.6e-23 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACDOP11_49_17
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(16443..17120)
DNA (678bp) protein (226aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=54)
Displaying 17 items

View Taxonomy