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NECEvent2014_5_8_scaffold_541_9

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(9328..10035)

Top 3 Functional Annotations

Value Algorithm Source
LytTr DNA-binding domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SVT5_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 235.0
  • Bit_score: 462
  • Evalue 2.80e-127
  • rbh
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS23189.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 465
  • Evalue 4.60e-128
two component transcriptional regulator, LytTR family similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 234.0
  • Bit_score: 359
  • Evalue 7.20e-97

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
ATGCTAAAAATAGCAATTTGCGATGATGAAGTTCATCAAAGAATTCCACTTATAAATATGATAGAAAAAGCCTTAAAACTTAAAAATATAAACTACTTCATATATCAATATGAAAGTGGTGAAGAATTACTACAGTCAAAGTTAGAAATGGATTTGTACTTTTTAGATATATATATGGATAAACTTAGTGGTATAGAAACAGCAAAGAAAATTAGGGAAACAAATGGAAAAGCAATCATTATATTTATAACTGTTCTTAAGGAATATGTATTTGAAGCTTTTGATGTAAGAGCTTTTCATTACATTTTAAAACCTGTAAAAGAAAAAAAATTAAGAGAAGTTCTATATTCTGCTTTATTACAATTTCAAGGAACAGATAAATTTATTCTTGCAAAAACTATTAGTAAATCCACTAAAATTTTTATTAAAGATATACTGTATATAGAATCTCAACTGAGAAAAATAAAGGTTCATACCACTTATGACGTCATTGAATATTATCAAAAATTATCTGATGTTGAAAATGAATTAAAAGACTGTAGCTTTTTCAGATGTCATAAAAGCTATATTGTAAATTTAAAGTATGTACGAAGCTATGATGCTGTATTTATAACTTTAAAAAATGGTGAAAAAATATATATTTCTAAACACAAGTTCTCTGATTTTTCAAAGACCTTTATGTACTATTTAAAAAGCGAGGGATTATAA
PROTEIN sequence
Length: 236
MLKIAICDDEVHQRIPLINMIEKALKLKNINYFIYQYESGEELLQSKLEMDLYFLDIYMDKLSGIETAKKIRETNGKAIIIFITVLKEYVFEAFDVRAFHYILKPVKEKKLREVLYSALLQFQGTDKFILAKTISKSTKIFIKDILYIESQLRKIKVHTTYDVIEYYQKLSDVENELKDCSFFRCHKSYIVNLKYVRSYDAVFITLKNGEKIYISKHKFSDFSKTFMYYLKSEGL*