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PW_scaffold_7

Alias: PW_Methanogen_55_643_2

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Displaying items 1-30 of 85 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_7_1
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..1111
DNA (1110bp) protein (370aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG07291.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DS
Major facilitator superfamily MFS_1
PW_scaffold_7_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1134..1883
DNA (750bp) protein (250aa)
hypothetical protein
Uncharacterized protein conserved in archaea
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_7_3
unknown

Not on your lists

comp(1876..2124)
DNA (249bp) protein (83aa)
PW_scaffold_7_4
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2504..3589)
DNA (1086bp) protein (362aa)
OB-fold nucleic acid binding domain-containing protein
OB-fold nucleic acid binding domain protein {ECO:0000313|EMBL:AET63827.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="
OB-fold nucleic acid binding domain protein
PW_scaffold_7_5
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3579..6329)
DNA (2751bp) protein (917aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase
PW_scaffold_7_6
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(6471..7451)
DNA (981bp) protein (327aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
O-sialoglycoprotein endopeptidase, putative {ECO:0000313|EMBL:AEB68459.1}; EC=3.4.24.57 {ECO:0000313|EMBL:AEB68459.1};; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog
PW_scaffold_7_7
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7565..8551
DNA (987bp) protein (329aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin r
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase
PW_scaffold_7_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8721..9107)
DNA (387bp) protein (129aa)
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ73457.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanop
transcriptional regulator TrmB
Transcriptional regulator TrmB
PW_scaffold_7_9
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9203..10450
DNA (1248bp) protein (416aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|HAMAP-Rule:MF_00586, ECO:0000256|RuleBase:RU004457}; Short=Glu-ADT subunit D {ECO:0000256|HAMAP-Rule:MF_00586};; EC=6.3.5.- {ECO:0000256|HAMA
glutamyl-tRNA(Gln) amidotransferase subunit D
Glutamyl-tRNA(Gln) amidotransferase subunit D
PW_scaffold_7_10
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10451..11086)
DNA (636bp) protein (212aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH60350.1}; Flags: Precursor;; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source=
Putative uncharacterized protein
PW_scaffold_7_11
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11079..12383)
DNA (1305bp) protein (435aa)
AAA family ATPase
ATPase (AAA superfamily) {ECO:0000313|EMBL:CAJ37365.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
ATPase (AAA superfamily)
PW_scaffold_7_12
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12592..13482)
DNA (891bp) protein (297aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM05384.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ac
Uncharacterized protein
PW_scaffold_7_13
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13746..14714)
DNA (969bp) protein (323aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
undecaprenyl diphosphate synthase
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific
PW_scaffold_7_14
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14768..15514
DNA (747bp) protein (249aa)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
PW_scaffold_7_15
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15773..16864)
DNA (1092bp) protein (364aa)
uroporphyrinogen-III decarboxylase
Uroporphyrinogen-III decarboxylase
Tax=BJP_08E140C01_Clostridiales_46_19
PW_scaffold_7_16
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16857..17534)
DNA (678bp) protein (226aa)
Dimethylsulfide methyltransferase corrinoid protein {ECO:0000313|EMBL:AKB86101.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoid
mtbC; coenzyme B12-binding:cobalamin-dependent methionine synthase, B12-binding
Coenzyme B12-binding:Cobalamin-dependent methionine synthase, B12-binding
PW_scaffold_7_17
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(17624..18025)
DNA (402bp) protein (134aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK61059.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticall
Uncharacterized protein
PW_scaffold_7_18
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18034..19515)
DNA (1482bp) protein (494aa)
Serine--tRNA ligase (EC:6.1.1.11)
Type-2 serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01278}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_01278};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01278}; Seryl-tRNA(Ser/Sec) synthetase {E
Type-2 serine--tRNA ligase
PW_scaffold_7_19
unknown

Not on your lists

comp(19546..19776)
DNA (231bp) protein (77aa)
PW_scaffold_7_20
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20012..20530
DNA (519bp) protein (173aa)
Putative adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-R
hypothetical protein
Uncharacterized protein
PW_scaffold_7_21
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20511..20897)
DNA (387bp) protein (129aa)
molybdopterin dinucleotide-binding region
Molybdopterin dinucleotide-binding region {ECO:0000313|EMBL:AEH60517.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="
Molybdopterin dinucleotide-binding region
PW_scaffold_7_22
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20906..21865)
DNA (960bp) protein (320aa)
methanogenesis marker protein 7
Putative methanogenesis marker protein 7 {ECO:0000313|EMBL:AKB16079.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source=
Methanogenesis marker protein 7
PW_scaffold_7_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(21828..22517)
DNA (690bp) protein (230aa)
methanogenesis marker protein 17 Tax=RBG_16_Euryarchaeota_41_19_curated
methanogenesis marker protein 17
Methanogenesis marker protein 17
PW_scaffold_7_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22507..23787)
DNA (1281bp) protein (427aa)
CoA-substrate-specific enzyme activase
Putative methanogenesis marker protein 15 {ECO:0000313|EMBL:KCZ72685.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus M
Putative methanogenesis marker protein 15
PW_scaffold_7_25
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23756..24208)
DNA (453bp) protein (151aa)
methanogenesis marker protein 5
Putative methanogenesis marker protein 5 {ECO:0000313|EMBL:AFD00593.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Metha
Putative methanogenesis marker protein 5
PW_scaffold_7_26
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24228..24725)
DNA (498bp) protein (166aa)
putative methanogenesis marker protein 6
Putative methanogenesis marker protein 6 {ECO:0000313|EMBL:ETA68218.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="M
Putative methanogenesis marker protein 6
PW_scaffold_7_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24725..26251)
DNA (1527bp) protein (509aa)
UPF0288 protein ANME2D_01119 {ECO:0000256|HAMAP-Rule:MF_01089}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoper
Putative methanogenesis marker protein 3
UPF0288 protein Mhar_1406
PW_scaffold_7_28
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26289..27875)
DNA (1587bp) protein (529aa)
Methyl coenzyme M reductase system component A2 {ECO:0000313|EMBL:AKB83803.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;"
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
PW_scaffold_7_29
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28188..28742
DNA (555bp) protein (185aa)
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
orotate phosphoribosyltransferase
Orotate phosphoribosyltransferase
PW_scaffold_7_30
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28775..29230
DNA (456bp) protein (152aa)
alpha-ribazole phosphatase CobZ
Alpha-ribazole phosphatase CobZ {ECO:0000313|EMBL:AGB49742.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Met
Alpha-ribazole phosphatase CobZ
Displaying items 1-30 of 85 in total

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