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PW_scaffold_30

Alias: PW_Methanogen_55_643_7

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Displaying items 31-60 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_30_31
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28789..29376)
DNA (588bp) protein (196aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABK14838.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
4Fe-4S ferredoxin, iron-sulfur binding domain protein
PW_scaffold_30_32
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(29346..30431)
DNA (1086bp) protein (362aa)
F420H2 dehydrogenase subunit H
F(420)H(2) oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; F(420)H(2) dehydrogenase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; FPO subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1094
F(420)H(2) oxidoreductase subunit H
PW_scaffold_30_33
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(30441..31544)
DNA (1104bp) protein (368aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
F420H2 dehydrogenase subunit C {ECO:0000313|EMBL:ABK14836.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta t
F420H2 dehydrogenase subunit C
PW_scaffold_30_34
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(31550..32194)
DNA (645bp) protein (215aa)
NADH-quinone oxidoreductase subunit C/D {ECO:0000313|EMBL:AKB85795.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source
NADH (or F420H2) dehydrogenase subunit C
NADH (Or F420H2) dehydrogenase, subunit C
PW_scaffold_30_35
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(32206..32730)
DNA (525bp) protein (175aa)
fpoB; F(420)H(2) dehydrogenase, subunit FpoB
F(420)H(2) dehydrogenase, subunit FpoB {ECO:0000313|EMBL:AAM04910.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Me
F420H2 dehydrogenase subunit
PW_scaffold_30_36
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(32727..33128)
DNA (402bp) protein (134aa)
hypothetical protein
NADH dehydrogenase subunit A {ECO:0000313|EMBL:AKB32193.1}; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarc
F420H2 dehydrogenase subunit
PW_scaffold_30_37
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

33317..36943
DNA (3627bp) protein (1209aa)
XRE family transcriptional regulator rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AEA46045.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglob
Transcriptional regulator, XRE family
PW_scaffold_30_38
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

36959..37537
DNA (579bp) protein (193aa)
Mn2+-dependent serine/threonine protein kinase
Mn2+-dependent serine/threonine protein kinase {ECO:0000313|EMBL:AET63752.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sourc
Mn2+-dependent serine/threonine protein kinase
PW_scaffold_30_39
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

37539..38549
DNA (1011bp) protein (337aa)
RNA cap guanine-N2 methyltransferase
RNA cap guanine-N2 methyltransferase {ECO:0000313|EMBL:ADE36866.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="M
RNA cap guanine-N2 methyltransferase
PW_scaffold_30_40
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(38570..39379)
DNA (810bp) protein (270aa)
Serine/threonine protein phosphatase catalytic subunit (EC:3.1.3.16)
Uncharacterized protein {ECO:0000313|EMBL:AGT34917.1}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
Bis(5'nucleosyl)-tetraphosphatase, ApaH
PW_scaffold_30_41
unknown

Not on your lists

comp(39396..39725)
DNA (330bp) protein (110aa)
PW_scaffold_30_42
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(39993..40469)
DNA (477bp) protein (159aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_13_Chloroflexi_54_8_curated
hspC; small heat shock protein (class I)
Small heat shock protein
PW_scaffold_30_43
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(40549..42270)
DNA (1722bp) protein (574aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1094980 species="Archaea; Eury
argS; arginyl-tRNA synthetase
Arginine--tRNA ligase
PW_scaffold_30_44
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(42414..43364)
DNA (951bp) protein (317aa)
nucleoside recognition domain-containing protein
Nucleoside recognition domain protein {ECO:0000313|EMBL:ADI73669.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Me
Nucleoside recognition domain protein
PW_scaffold_30_45
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(43416..43889)
DNA (474bp) protein (158aa)
Phosphodiesterase {ECO:0000313|EMBL:KKG26116.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H
hypothetical protein
Uncharacterized protein
PW_scaffold_30_46
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(43886..45043)
DNA (1158bp) protein (386aa)
class I and II aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II {ECO:0000313|EMBL:AEH60752.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEH60752.1};; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarci
Aminotransferase class I and II
PW_scaffold_30_47
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(45044..45466)
DNA (423bp) protein (141aa)
ribH; riboflavin synthase, beta subunit (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
PW_scaffold_30_48
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(45506..47095)
DNA (1590bp) protein (530aa)
ABC1 family protein {ECO:0000313|EMBL:AKB24264.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. M
unusual protein kinase
Unusual protein kinase
PW_scaffold_30_49
unknown

Not on your lists

comp(47105..47269)
DNA (165bp) protein (55aa)
PW_scaffold_30_50
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(47266..48159)
DNA (894bp) protein (298aa)
hypothetical protein
Uncharacterized protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_30_51
unknown

Not on your lists

48244..48387
DNA (144bp) protein (48aa)
PW_scaffold_30_52
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

48427..49362
DNA (936bp) protein (312aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase
PW_scaffold_30_53
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(49626..50942)
DNA (1317bp) protein (439aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ADB58082.1}; EC=2.7.7.13 {ECO:0000313|EMBL:ADB58082.1};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeogl
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
PW_scaffold_30_54
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

51023..52057
DNA (1035bp) protein (345aa)
glycosidase-like protein
Glycosidase related protein {ECO:0000313|EMBL:AEA46317.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus venefic
Glycosidase related protein
PW_scaffold_30_55
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(52041..53090)
DNA (1050bp) protein (350aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB58642.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (
Putative uncharacterized protein
PW_scaffold_30_56
unknown

Not on your lists

comp(53205..53741)
DNA (537bp) protein (179aa)
PW_scaffold_30_57
unknown

Not on your lists

comp(53738..54139)
DNA (402bp) protein (134aa)
PW_scaffold_30_58
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(54187..55290)
DNA (1104bp) protein (368aa)
FO synthase subunit 2 {ECO:0000256|HAMAP-Rule:MF_01612}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01612};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 {ECO:0000256|HAMAP-Rule:MF_01612}
radical SAM domain protein, CofH subfamily
FO synthase subunit 2
PW_scaffold_30_59
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

55477..56502
DNA (1026bp) protein (342aa)
Methionine synthase vitamin-B12 independent
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:AEH59893.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source
Methionine synthase vitamin-B12 independent
PW_scaffold_30_60
unknown

Not on your lists

56984..57160
DNA (177bp) protein (59aa)
Displaying items 31-60 of 60 in total

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