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PW_scaffold_30

Alias: PW_Methanogen_55_643_7

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_30_1
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(285..1496)
DNA (1212bp) protein (404aa)
IS element ISTsi1 orfB trasposase
IS element ISTsi1 orfB, putative trasposase {ECO:0000313|EMBL:AEK71995.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermoco
IS element ISTsi1 orfB, putative trasposase
PW_scaffold_30_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1477..1878)
DNA (402bp) protein (134aa)
IS element ISTsi1 orfA, resolvase
IS element ISTsi1 orfA, putative resolvase {ECO:0000313|EMBL:ACS91089.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococc
Predicted site-specific integrase-resolvase
PW_scaffold_30_3
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(1929..3269)
DNA (1341bp) protein (447aa)
glucose-1-phosphate thymidylyltransferase rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:ACO03093.1}; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (str
Glucose-1-phosphate thymidylyltransferase
PW_scaffold_30_4
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(3285..4511)
DNA (1227bp) protein (409aa)
myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:ADB57510.1}; Flags: Precursor;; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" sour
Myo-inositol-1-phosphate synthase
PW_scaffold_30_5
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(4916..5713)
DNA (798bp) protein (266aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG14113.1}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococ
Putative uncharacterized protein
PW_scaffold_30_6
unknown

Not on your lists

5890..6138
DNA (249bp) protein (83aa)
PW_scaffold_30_7
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

6143..7330
DNA (1188bp) protein (396aa)
Sep-tRNA:Cys-tRNA synthase {ECO:0000313|EMBL:AKG90670.1}; EC=2.5.1.73 {ECO:0000313|EMBL:AKG90670.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geo
Sep-tRNA
O-phospho-L-seryl-tRNA:Cys-tRNA synthase
PW_scaffold_30_8
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7423..8322
DNA (900bp) protein (300aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB84725.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoid
hypothetical protein
Putative uncharacterized protein
PW_scaffold_30_9
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(8287..8517)
DNA (231bp) protein (77aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY90146.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
SirA family protein
PW_scaffold_30_10
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(8514..9314)
DNA (801bp) protein (267aa)
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ADC66337.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus p
UBA/THIF-type NAD/FAD binding protein
PW_scaffold_30_11
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(9317..9592)
DNA (276bp) protein (92aa)
MoaD family protein
MoaD family protein {ECO:0000313|EMBL:ADC66338.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DS
MoaD family protein
PW_scaffold_30_12
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(9580..10797)
DNA (1218bp) protein (406aa)
Threonine synthase rbh
Threonine synthase {ECO:0000313|EMBL:AIY90143.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
Threonine synthase
PW_scaffold_30_13
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(10861..11271)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:AKG90663.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
hypothetical protein
Uncharacterized protein
PW_scaffold_30_14
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11276..11521)
DNA (246bp) protein (82aa)
SirA-like protein {ECO:0000313|EMBL:EAR21912.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis N
SirA-like protein
PW_scaffold_30_15
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(11490..12692)
DNA (1203bp) protein (401aa)
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066};; ATP-sulfurylase {ECO:0000256|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000
Sulfate adenylyltransferase
PW_scaffold_30_16
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(12689..12985)
DNA (297bp) protein (99aa)
4Fe-4S dicluster domain {ECO:0000313|EMBL:AKG90665.1}; EC=1.8.99.2 {ECO:0000313|EMBL:AKG90665.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglo
4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein
PW_scaffold_30_17
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(12985..14604)
DNA (1620bp) protein (540aa)
Dissimilatory adenylylsulfate reductase alpha subunit {ECO:0000313|EMBL:AKG90666.1}; EC=1.8.99.2 {ECO:0000313|EMBL:AKG90666.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglob
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase
PW_scaffold_30_18
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(14591..14845)
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY90138.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
SirA family protein
PW_scaffold_30_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14846..16276)
DNA (1431bp) protein (477aa)
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:KCZ70985.1}; EC=1.7.7.1 {ECO:0000313|EMBL:KCZ70985.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
nitrite and sulfite reductase 4Fe-4S domain-containing protein
Nitrite and sulphite reductase 4Fe-4S region
PW_scaffold_30_20
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16430..18703
DNA (2274bp) protein (758aa)
ATP-dependent RNA helicase, EIF-4A family {ECO:0000313|EMBL:AKB26638.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source
Hef nuclease
DEAD/DEAH box helicase domain protein
PW_scaffold_30_21
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18965..19714)
DNA (750bp) protein (250aa)
MIP family channel protein
MIP family channel protein {ECO:0000313|EMBL:AGB49225.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanom
MIP family channel protein
PW_scaffold_30_22
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19783..21258)
DNA (1476bp) protein (492aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49224.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanometh
Uncharacterized protein
PW_scaffold_30_23
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21433..22452
DNA (1020bp) protein (340aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EJG07942.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;"
PAS domain S-box
Multi-sensor signal transduction histidine kinase
PW_scaffold_30_24
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22686..23030)
DNA (345bp) protein (115aa)
F420H2 dehydrogenase, subunit FpoO
F420H2 dehydrogenase, subunit FpoO {ECO:0000313|EMBL:ADE37085.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Met
F420H2 dehydrogenase, subunit FpoO
PW_scaffold_30_25
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23040..24512)
DNA (1473bp) protein (491aa)
proton-translocating NADH-quinone oxidoreductase subunit N
Proton-translocating NADH-quinone oxidoreductase, chain N {ECO:0000313|EMBL:ADI73210.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanoha
Proton-translocating NADH-quinone oxidoreductase, chain N
PW_scaffold_30_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24509..25948)
DNA (1440bp) protein (480aa)
proton-translocating NADH-quinone oxidoreductase subunit M
Proton-translocating NADH-quinone oxidoreductase, chain M
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_30_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25948..27924)
DNA (1977bp) protein (659aa)
proton-translocating NADH-quinone oxidoreductase, chain L
Proton-translocating NADH-quinone oxidoreductase, chain L
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_30_28
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27926..28228)
DNA (303bp) protein (101aa)
F420H2 dehydrogenase subunit K
F420H2 dehydrogenase subunit K {ECO:0000313|EMBL:AFV24777.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobu
F420H2 dehydrogenase subunit K
PW_scaffold_30_29
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28225..28524)
DNA (300bp) protein (100aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:EGL81783.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalka
F(420)H(2) dehydrogenase, subunit FpoJ
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
PW_scaffold_30_30
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28517..28792)
DNA (276bp) protein (92aa)
NADH dehydrogenase subunit J (EC:1.6.5.3)
NADH dehydrogenase subunit J {ECO:0000313|EMBL:AKB28286.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarc
NADH dehydrogenase subunit J
Displaying items 1-30 of 60 in total

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