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PW_scaffold_34

Alias: PW_Methanogen_55_643_8

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_34_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

918..1238
DNA (321bp) protein (107aa)
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71478.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanop
transcriptional regulator, TrmB
Transcriptional regulator, TrmB
PW_scaffold_34_2
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1357..2619
DNA (1263bp) protein (421aa)
eno; Enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase
PW_scaffold_34_3
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2630..3589
DNA (960bp) protein (320aa)
ppaC; manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:AEB68486.1}; EC=3.6.1.1 {ECO:0000313|EMBL:AEB68486.1};; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
Manganese-dependent inorganic pyrophosphatase
PW_scaffold_34_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3589..4233
DNA (645bp) protein (215aa)
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] Tax=RBG_16_Euryarchaeota_41_19_curated
2-phospho-L-lactate guanylyltransferase CofC
2-phospho-L-lactate guanylyltransferase
PW_scaffold_34_5
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

4261..4524
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAB90581.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
Putative uncharacterized protein
PW_scaffold_34_6
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(4540..5544)
DNA (1005bp) protein (335aa)
sodium/calcium exchanger membrane protein; K07301 inner membrane protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region
PW_scaffold_34_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5586..7397
DNA (1812bp) protein (604aa)
Pyruvate/oxaloacetate carboxyltransferase {ECO:0000313|EMBL:KCZ70291.1}; EC=6.4.1.1 {ECO:0000313|EMBL:KCZ70291.1};; Flags: Fragment;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Me
pyruvate carboxylase subunit B (EC:4.1.1.3)
Pyruvate carboxylase subunit B
PW_scaffold_34_8
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7439..8359
DNA (921bp) protein (307aa)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:KKG11899.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="
2-phospho-L-lactate transferase
2-phospho-L-lactate transferase
PW_scaffold_34_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8359..9132
DNA (774bp) protein (258aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
ribosomal RNA methyltransferase RrmJ/FtsJ
Ribosomal RNA large subunit methyltransferase E
PW_scaffold_34_10
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(9123..9980)
DNA (858bp) protein (286aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase, group I {ECO:0000313|EMBL:AIG97806.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AIG97806.1};; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeogloba
Putative branched-chain-amino-acid aminotransferase
PW_scaffold_34_11
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10003..10794)
DNA (792bp) protein (264aa)
putative phospho-2-dehydro-3-deoxyheptonate aldolase
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
Putative phospho-2-dehydro-3-deoxyheptonate aldolase
PW_scaffold_34_12
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11079..12038
DNA (960bp) protein (320aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
fructose-1,6-bisphosphatase I (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 alias=gwa2_scaffold_1421_124 id=5046250 tax=GW2011_AR10 species=unknown genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_desc=gwa2_.44_58 (temp)
PW_scaffold_34_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12032..12505)
DNA (474bp) protein (158aa)
Universal stress protein UspA-like protein {ECO:0000313|EMBL:KCZ72244.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus
universal stress protein
Universal stress protein
PW_scaffold_34_14
unknown

Not on your lists

comp(12694..13431)
DNA (738bp) protein (246aa)
PW_scaffold_34_15
unknown

Not on your lists

comp(13649..14371)
DNA (723bp) protein (241aa)
PW_scaffold_34_16
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(14577..17159)
DNA (2583bp) protein (861aa)
Type III site-specific deoxyribonuclease (EC:3.1.21.5) rbh
Type III site-specific deoxyribonuclease {ECO:0000313|EMBL:ACR78790.1}; EC=3.1.21.5 {ECO:0000313|EMBL:ACR78790.1};; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.
Type III site-specific deoxyribonuclease
PW_scaffold_34_17
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17200..17994)
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:ESE41767.1}; TaxID=1353536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella decolorat
PW_scaffold_34_18
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(17997..19952)
DNA (1956bp) protein (652aa)
DNA methylase N-4/N-6 domain protein rbh
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ACR78791.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1)
DNA methylase N-4/N-6 domain protein
PW_scaffold_34_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

20105..20350
DNA (246bp) protein (82aa)
integrase family protein Tax=CG_Aenigma_01
site-specific recombinase XerD
Site-specific recombinase XerD
PW_scaffold_34_20
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20547..22955)
DNA (2409bp) protein (803aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB82232.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina b
hypothetical protein
Uncharacterized protein
PW_scaffold_34_21
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22952..24760)
DNA (1809bp) protein (603aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV22330.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psych
Uncharacterized protein
PW_scaffold_34_22
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24801..25655)
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:KGK99615.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides
hypothetical protein
Uncharacterized protein
PW_scaffold_34_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25665..26609)
DNA (945bp) protein (315aa)
MoxR-like ATPase {ECO:0000313|EMBL:KCZ70707.1}; EC=3.6.3.- {ECO:0000313|EMBL:KCZ70707.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedena
ATPase
ATPase associated with various cellular activities AAA_3
PW_scaffold_34_24
Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1), Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26623..27507)
DNA (885bp) protein (295aa)
hypothetical protein
Uncharacterized protein
PW_scaffold_34_25
unknown

Not on your lists

comp(27515..27820)
DNA (306bp) protein (102aa)
PW_scaffold_34_26
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(27902..28213)
DNA (312bp) protein (104aa)
rps10p; 30S ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta th
30S ribosomal protein S10
PW_scaffold_34_27
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28248..29516)
DNA (1269bp) protein (423aa)
tuf; elongation factor EF-1 alpha subunit (EC:2.7.7.4)
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
PW_scaffold_34_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(29785..31053)
DNA (1269bp) protein (423aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_16_Euryarchaeota_41_19_curated
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative
PW_scaffold_34_29
unknown

Not on your lists

31242..31508
DNA (267bp) protein (89aa)
PW_scaffold_34_30
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31623..33812
DNA (2190bp) protein (730aa)
translation elongation factor aEF-2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Meth
Elongation factor 2
Displaying items 1-30 of 49 in total

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