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PW_scaffold_107_18

Organism: PW_Methanogen_55_53

near complete RP 31 / 55 MC: 1 BSCG 19 / 51 ASCG 36 / 38
Location: comp(14648..15388)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 203
  • Evalue 9.00e-50
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocell UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 203
  • Evalue 4.50e-49
Putative RNA-binding protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

Methanocella conradii → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 741
ATGAGGAGAAAGCTGCTTAGGGACAGCAGCGCTGAAAATAAGGCTCCCAATGAGAGGGCACATGAGCAAAGGGCCAGAAGGGAACGCCAGAGAGGAACACCAAGGGAGCGGCCAAGGGAGGAAAAAATGTCAGAGGAGCCATTCAGGGAGATAGTGGAGAGACCAGAGGAGCTAAAAGATGCACCCTTCGTGCTTCCGGGAGACAGGATTGGCAGTGCCGAGGAGTACCTTCCCGGAAGCGGCACATACGAGCACATGGGCGGAATCTATGCTGCCGTGGCAGGACGTCCATACTACGACAGAGAGCAGCGCTACACCAAGGTGTTTCCAGAGATGAACGCCCCGCACAGAATCAGGGAGGGCGACATCGTGATAGGTGAGGTCACCGACATCAAGGGCTCGATGGTGATGGTGTCCATCGTGTGCCTAGATGACATGGGCGAGCGGGAGATACCCAATCTGCAGCCTGCTGTCATCCACGTCTCCAATGTGAAGGATTCGTACGTGAAGGAGCTCTCCTCCGAGTTCGGATACGGGGACATCATCAAGGCAAGGGTGATAGACTCCAAGAACATGAGGCTTTCCACAGAGGGACCAGAGCTCGGTGTGCTCAAGGCACGGTGCCAGAGGTGTCGCGTTCCCGCAAGGCTGGAGGGTGAGCGGCTGGTGTGTCCATCGTGCGGAGCCATGCTGAAGAGAAAGCTTGCAAGTGGTTTTGCTCAGGGACTTCTCAAAAGGTGA
PROTEIN sequence
Length: 247
MRRKLLRDSSAENKAPNERAHEQRARRERQRGTPRERPREEKMSEEPFREIVERPEELKDAPFVLPGDRIGSAEEYLPGSGTYEHMGGIYAAVAGRPYYDREQRYTKVFPEMNAPHRIREGDIVIGEVTDIKGSMVMVSIVCLDDMGEREIPNLQPAVIHVSNVKDSYVKELSSEFGYGDIIKARVIDSKNMRLSTEGPELGVLKARCQRCRVPARLEGERLVCPSCGAMLKRKLASGFAQGLLKR*