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PW_scaffold_107

Alias: PW_Methanogen_55_643_17

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_107_1
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

406..1638
DNA (1233bp) protein (411aa)
2(4Fe-4S) ferredoxin-domain-containing protein
2(4Fe-4S) ferredoxin-domain protein {ECO:0000313|EMBL:CAJ37933.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocell
2(4Fe-4S) ferredoxin-domain protein
PW_scaffold_107_2
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1692..1871)
DNA (180bp) protein (60aa)
Ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
PW_scaffold_107_3
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1932..6512)
DNA (4581bp) protein (1527aa)
magnesium chelatase (EC:6.6.1.1)
Magnesium chelatase {ECO:0000313|EMBL:ADI74133.1}; EC=6.6.1.1 {ECO:0000313|EMBL:ADI74133.1};; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Meth
Magnesium chelatase
PW_scaffold_107_4
unknown

Not on your lists

7072..7365
DNA (294bp) protein (98aa)
PW_scaffold_107_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7366..8589
DNA (1224bp) protein (408aa)
hypothetical protein
bmx:BMS_3256 putative selenocysteine lyase alias=RAAC2_WWE3_C00001G00834,RAAC2_WWE3_834 id=725881 tax=RAAC2_WWE3 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=WWE3
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_107_6

Not on your lists

comp(8584..9651)
DNA (1068bp) protein (356aa)
Probable histidinol-phosphate aminotransferase {ECO:0000313|EMBL:CAI64215.1}; EC=2.6.1.9 {ECO:0000313|EMBL:CAI64215.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured arch
cobD; putative L-threonine-O-3-phosphate decarboxylase (EC:4.1.1.81)
Probable histidinol-phosphate aminotransferase
PW_scaffold_107_7
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9644..10393)
DNA (750bp) protein (250aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:ETA67136.1}; EC=4.2.1.75 {ECO:0000313|EMBL:ETA67136.1};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarci
hemD; uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase
PW_scaffold_107_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10390..11142)
DNA (753bp) protein (251aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:KCZ72557.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KCZ72557.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Cand
Uroporphyrinogen-III methyltransferase
Uroporphyrin-III C-methyltransferase
PW_scaffold_107_9
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(11147..11722)
DNA (576bp) protein (192aa)
30S ribosomal protein S3Ae
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=679901 species="Archaea; Euryarchaeota; Meth
30S ribosomal protein S3Ae
PW_scaffold_107_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11737..11916)
DNA (180bp) protein (60aa)
hypothetical protein
Uncharacterized protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_107_11
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(11916..12065)
DNA (150bp) protein (50aa)
SSU ribosomal protein S27AE
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sul
SSU ribosomal protein S27AE
PW_scaffold_107_12
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12086..12400)
DNA (315bp) protein (105aa)
30S ribosomal protein S24e
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methan
30S ribosomal protein S24e
PW_scaffold_107_13
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12390..12950)
DNA (561bp) protein (187aa)
UPF0218 protein MCMEM_0431 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methano
hypothetical protein
UPF0218 protein Mpsy_0973
PW_scaffold_107_14
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12952..13137)
DNA (186bp) protein (62aa)
rpoE2; putative DNA-directed RNA polymerase, subunit E2
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methan
Putative DNA-directed RNA polymerase, subunit E2
PW_scaffold_107_15
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(13134..13703)
DNA (570bp) protein (190aa)
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase, subunit E {ECO:0000313|EMBL:AET65267.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Metha
DNA-directed RNA polymerase, subunit E
PW_scaffold_107_16
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13798..14364)
DNA (567bp) protein (189aa)
hypothetical protein
UPF0215 protein Metho_2208 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Meth
UPF0215 protein Metho_2208
PW_scaffold_107_17
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14364..14642)
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinale
DNA-directed RNA polymerase subunit L
PW_scaffold_107_18
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14648..15388)
DNA (741bp) protein (247aa)
RNA-binding protein
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocell
Putative RNA-binding protein
PW_scaffold_107_19
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15369..16025)
DNA (657bp) protein (219aa)
putative RNA methylase
Putative RNA methylase {ECO:0000313|EMBL:AGB50398.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethy
Putative RNA methylase
PW_scaffold_107_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(16022..16576)
DNA (555bp) protein (185aa)
Ham1-like protein Tax=RBG_16_Euryarchaeota_41_19_curated
HamI-like protein
Non-canonical purine NTP pyrophosphatase
PW_scaffold_107_21
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16573..18051)
DNA (1479bp) protein (493aa)
Putative methanogenesis marker protein 14 {ECO:0000313|EMBL:ETA68501.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="
hypothetical protein
Uncharacterized protein
PW_scaffold_107_22
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18072..18482)
DNA (411bp) protein (137aa)
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABK14501.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain
Thioredoxin
PW_scaffold_107_23
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18605..18892
DNA (288bp) protein (96aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH61562.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhil
Putative uncharacterized protein
PW_scaffold_107_24
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18894..19715
DNA (822bp) protein (274aa)
hisF-2; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000255|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000255|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF
PW_scaffold_107_25
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(19710..20180)
DNA (471bp) protein (157aa)
Putative nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module {ECO:0000313|EMBL:AKG91804.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archa
hypothetical protein
Uncharacterized protein
PW_scaffold_107_26
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20177..21085)
DNA (909bp) protein (303aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=11
Phosphoribosylaminoimidazole-succinocarboxamide synthase, putative
Phosphoribosylaminoimidazole-succinocarboxamide synthase, putative
PW_scaffold_107_27

Not on your lists

21237..22217
DNA (981bp) protein (327aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM62635.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein
PW_scaffold_107_28
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

22214..22984
DNA (771bp) protein (257aa)
ABC transporter; K09686 antibiotic transport system permease protein Tax=RBG_13_Aminicenantes_63_10_curated
ABC transporter
ABC-2 type transporter, permease protein
PW_scaffold_107_29
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

23517..24203
DNA (687bp) protein (229aa)
ABC-type transporters, involved in lipoprotein release, ATPase component; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Micrarchaeota_36_9_curated
ABC transporter
ABC transporter related protein
PW_scaffold_107_30
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

24200..25141
DNA (942bp) protein (314aa)
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein
Putative uncharacterized protein
Displaying items 1-30 of 31 in total

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