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PW_scaffold_38_12

Organism: PW_Methanogen_55_53

near complete RP 31 / 55 MC: 1 BSCG 19 / 51 ASCG 36 / 38
Location: comp(10388..12298)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein, eukaryotic snRNP-like protein KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 665.0
  • Bit_score: 549
  • Evalue 1.30e-153
Putative RNA-binding protein, eukaryotic snRNP-like protein {ECO:0000313|EMBL:AFC98797.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocel UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 665.0
  • Bit_score: 549
  • Evalue 6.60e-153
Putative RNA-binding protein, eukaryotic snRNP-like protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 548
  • Evalue 1.90e-153

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Taxonomy

Methanocella conradii → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1911
ATGAAGCACGAGATGACGGGCGTGGACGTCCACTGCATCGTAGACGAGCTCACCTCCCTCGTGGGCGCGAAGGTGGGCAAGGTGTACCAGCACGACGAGGACCTCGTGAGGCTCACCCTCGCAAAGGGTGGAAGACACAACCTGCTCATTCAGGCAGGACGGCGCCTTCACCTCACGCAGCACCCCCCCATCACTCCAGTCGCCCCCCAGTTCGCCATGCTCGCAAGAAAGCTCATTCAGGGCGGACGCATCACCTCCATATCTCAGCAGGGCTTCGACAGGCTGGTGATGATTGGCATAGAGAGGGCTGGCGAGCAGCACACACTCGTTGCAGAGCTGTTCGCAAGGGGTAACGTGCTGCTGCTGGACGAGGAGGGGCGCATAGAGGCATCGCTGAGGCAGTTCTCCTATCGTGAGAGGTCGCTTCGCACTGGAAGGCAGTATGTGCTTCCACCACCCCAGCCAGACCCAAGAGAGCTCGATGCAGCCGCACTTCAGGAAGTGCTGCGCTCCTCGGAGGCGGATGTGGTGCGCACCCTTGCCACCCGTGCGGGACTCGGCGGTCTGTACGCAGAGGAGGTGTGCGCCCTCTCGGGCATCGACAAACACATGTCCTCCTCGGAGGCTTTCGAGAGCAAGGAGGTTCTGGGTGCGCTTGAGAGCGCCATTGCTGCGCTGCTCGATAGGTTGGAGAAGAAGCGAAGGCCCCACATCGTGCTGGAAAGGGGCGAGCGCATGGACTGCGTCCCCGTGGAGCTCGTGCGCTATGAGAAGCACGAGAGGCAGTACTTCGACTCGTTCTCCCACGCTCTCGACGAGTTCTTCCTCGAGCAACCCCCTGAGCCCGTGGAGCAGAGGGGGCTTCTGGAGCGCAGACTCGAGTCACAGAGGCGCACCCTTGCGCGCTACGAGGAAGAGCGCCAGCAGGCTCTCAGGAAGGCTGAGGCGCTGTATGCCCACTACATGGAAGTGCAGCGGGCGCTCGAGCAGCTTCGGGCATCGAAGTCAGCAGAGGACATCGTGGTGGATGTGGCTCCCGAGAGGGGGATGGCAGCGCTGCTGCTCGATGGCATGAGGGTGGAGGTGCTGCTCGAGCAGGGCATAGAGCAGAGCGCCCAGCGCTACTATGAGCAAGCCAAAAAGCTCTCCCGCAAGATAGAGGGGGCAAAAAGGGCGATAGCCGAGACCGAGAGGCTGATGGCAGAGAGTCCCAGACCCAAGAGAAAGAAGGGTGGCTTTCTGGCGGAGAACATTCCGAAAAAGCAGGCATGGTATGAGCGGTTCAGGTGGTTCTACTCCTCTGATGGCTTTCTCGTCATCGGGGGGCGGGATGCCGACACCAACGAGCTGATATACGAAAAGTACATGGAGAAGCGGGACCTCGTGCTGCACGCTCAGGCACATGGCGCCCCGCTGACGCTCATCAAGACTGGGGGAAAGGACGTGCCAGAGAGCACGATACACGAGGCAGCCGTGTTCGCCGTCTCCTATTCGAATGTGTGGAAGGCTGGCCAGTACAGCGGGGAGTGCTACCTCGTGCGCCCAGAGCAAGTGAGCAAGACACCAGAGAGCGGTGAGTACATCCCCAAGGGCTCGTTTGTGATTCGTGGAAGGCGTGAGTACCACACCGTGCCCGTGGCAGCCGCCGTGGGCATCGAGCAAAAGCCGCTTCGGCTGATTGCAGGACCCCCCTCTGCGGTGCAAAAGCGTGCTGCCATATGGTTCGAGCTCGAGCCCGGAGAGCTCATGAGGGACGACATGGCAAAGCGCATATACCGCAGGCTCACAGAGCACATGGAGCGGGGGCTCGCCAAGAAGGTGGCGGCTCCAGAGCGCATCTCGATGGCGCTTCCCCCAGGGGGCTCTCGTGTGAGGAGCGAACACCTGAAGGGTGAAGGTATATTTGAGTGA
PROTEIN sequence
Length: 637
MKHEMTGVDVHCIVDELTSLVGAKVGKVYQHDEDLVRLTLAKGGRHNLLIQAGRRLHLTQHPPITPVAPQFAMLARKLIQGGRITSISQQGFDRLVMIGIERAGEQHTLVAELFARGNVLLLDEEGRIEASLRQFSYRERSLRTGRQYVLPPPQPDPRELDAAALQEVLRSSEADVVRTLATRAGLGGLYAEEVCALSGIDKHMSSSEAFESKEVLGALESAIAALLDRLEKKRRPHIVLERGERMDCVPVELVRYEKHERQYFDSFSHALDEFFLEQPPEPVEQRGLLERRLESQRRTLARYEEERQQALRKAEALYAHYMEVQRALEQLRASKSAEDIVVDVAPERGMAALLLDGMRVEVLLEQGIEQSAQRYYEQAKKLSRKIEGAKRAIAETERLMAESPRPKRKKGGFLAENIPKKQAWYERFRWFYSSDGFLVIGGRDADTNELIYEKYMEKRDLVLHAQAHGAPLTLIKTGGKDVPESTIHEAAVFAVSYSNVWKAGQYSGECYLVRPEQVSKTPESGEYIPKGSFVIRGRREYHTVPVAAAVGIEQKPLRLIAGPPSAVQKRAAIWFELEPGELMRDDMAKRIYRRLTEHMERGLAKKVAAPERISMALPPGGSRVRSEHLKGEGIFE*